This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3bcv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:31, 5 January 2022) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bcv.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a putative glycosyltransferase from Bacteroides fragilis==
-
|PDB= 3bcv |SIZE=350|CAPTION= <scene name='initialview01'>3bcv</scene>, resolution 2.35&Aring;
+
<StructureSection load='3bcv' size='340' side='right'caption='[[3bcv]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCV FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bcv OCA], [https://pdbe.org/3bcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bcv RCSB], [https://www.ebi.ac.uk/pdbsum/3bcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bcv ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bcv TOPSAN]</span></td></tr>
-
|GENE= BF2801 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 Bacteroides fragilis NCTC 9343])
+
</table>
-
|DOMAIN=
+
== Evolutionary Conservation ==
-
|RELATEDENTRY=
+
[[Image:Consurf_key_small.gif|200px|right]]
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bcv OCA], [http://www.ebi.ac.uk/pdbsum/3bcv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bcv RCSB]</span>
+
Check<jmol>
-
}}
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bcv_consurf.spt"</scriptWhenChecked>
-
'''Crystal structure of a putative glycosyltransferase from Bacteroides fragilis'''
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bcv ConSurf].
-
3BCV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCV OCA].
+
<div style="clear:both"></div>
-
[[Category: Bacteroides fragilis nctc 9343]]
+
__TOC__
-
[[Category: Single protein]]
+
</StructureSection>
-
[[Category: Burley, S K.]]
+
[[Category: Large Structures]]
-
[[Category: Kumaran, D.]]
+
[[Category: Burley SK]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Kumaran D]]
-
[[Category: Palani, K.]]
+
[[Category: Palani K]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Swaminathan S]]
-
[[Category: 12059a]]
+
-
[[Category: glycosyltransferase]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative ii]]
+
-
[[Category: psi-ii]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:25:11 2008''
+

Current revision

Crystal structure of a putative glycosyltransferase from Bacteroides fragilis

PDB ID 3bcv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bcv"
Personal tools