This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3be3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:32, 5 January 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3be3.png|left|200px]]
 
-
{{STRUCTURE_3be3| PDB=3be3 | SCENE= }}
+
==Crystal structure of a protein belonging to pfam DUF1653 from Bordetella bronchiseptica==
-
 
+
<StructureSection load='3be3' size='340' side='right'caption='[[3be3]]' scene=''>
-
===Crystal structure of a protein belonging to pfam DUF1653 from Bordetella bronchiseptica===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BE3 FirstGlance]. <br>
-
 
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3be3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3be3 OCA], [https://pdbe.org/3be3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3be3 RCSB], [https://www.ebi.ac.uk/pdbsum/3be3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3be3 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3be3 TOPSAN]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[3be3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica_rb50 Bordetella bronchiseptica rb50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BE3 OCA].
+
== Evolutionary Conservation ==
-
[[Category: Bordetella bronchiseptica rb50]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Burley, S K.]]
+
Check<jmol>
-
[[Category: Eswaramoorthy, S.]]
+
<jmolCheckbox>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/3be3_consurf.spt"</scriptWhenChecked>
-
[[Category: Swaminathan, S.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Tyagi, R.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: 10206d]]
+
</jmolCheckbox>
-
[[Category: New york sgx research center for structural genomic]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3be3 ConSurf].
-
[[Category: Nysgxrc]]
+
<div style="clear:both"></div>
-
[[Category: Pfam duf1653]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Burley SK]]
-
[[Category: Unknown function]]
+
[[Category: Eswaramoorthy S]]
 +
[[Category: Swaminathan S]]
 +
[[Category: Tyagi R]]

Current revision

Crystal structure of a protein belonging to pfam DUF1653 from Bordetella bronchiseptica

PDB ID 3be3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools