This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2iks

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:28, 12 January 2022) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2iks.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of N-terminal truncated DNA-binding transcriptional dual regulator from Escherichia coli K12==
-
|PDB= 2iks |SIZE=350|CAPTION= <scene name='initialview01'>2iks</scene>, resolution 1.85&Aring;
+
<StructureSection load='2iks' size='340' side='right'caption='[[2iks]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2iks]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IKS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IKS FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iks FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iks OCA], [https://pdbe.org/2iks PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iks RCSB], [https://www.ebi.ac.uk/pdbsum/2iks PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iks ProSAT], [https://www.topsan.org/Proteins/MCSG/2iks TOPSAN]</span></td></tr>
-
}}
+
</table>
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of N-terminal truncated DNA-binding transcriptional dual regulator from Escherichia coli K12'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ik/2iks_consurf.spt"</scriptWhenChecked>
-
2IKS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IKS OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Escherichia coli]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Chang, C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iks ConSurf].
-
[[Category: Edwards, A M.]]
+
<div style="clear:both"></div>
-
[[Category: Evdokimova, E.]]
+
__TOC__
-
[[Category: Joachimiak, A.]]
+
</StructureSection>
-
[[Category: Kagan, O.]]
+
[[Category: Ecoli]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Large Structures]]
-
[[Category: Savchenko, A.]]
+
[[Category: Chang, C]]
-
[[Category: dna-binding transcriptional dual regulator]]
+
[[Category: Edwards, A M]]
-
[[Category: escherichia coli k12]]
+
[[Category: Evdokimova, E]]
-
[[Category: mcsg]]
+
[[Category: Joachimiak, A]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Kagan, O]]
-
[[Category: protein structure initiative]]
+
[[Category: Structural genomic]]
-
[[Category: psi-2]]
+
[[Category: Savchenko, A]]
-
[[Category: structural genomic]]
+
[[Category: Dna-binding transcriptional dual regulator]]
-
 
+
[[Category: Escherichia coli k12]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:30:48 2008''
+
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Transcription]]

Current revision

Crystal structure of N-terminal truncated DNA-binding transcriptional dual regulator from Escherichia coli K12

PDB ID 2iks

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools