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3bk5
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="3bk5" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bk5" /> ''''''<br /> ==About this Structure== is a [h...) |
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| - | [[Image:3bk5.jpg|left|200px]]<br /><applet load="3bk5" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="3bk5" /> | ||
| - | ''''''<br /> | ||
| - | == | + | ==Crystal structure of putative outer membrane lipoprotein-sorting protein domain from Vibrio parahaemolyticus== |
| - | + | <StructureSection load='3bk5' size='340' side='right'caption='[[3bk5]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[3bk5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BK5 FirstGlance]. <br> | |
| - | '' | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP1287 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bk5 OCA], [https://pdbe.org/3bk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bk5 RCSB], [https://www.ebi.ac.uk/pdbsum/3bk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bk5 ProSAT], [https://www.topsan.org/Proteins/MCSG/3bk5 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bk/3bk5_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bk5 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Vibpa]] | ||
| + | [[Category: Abdullah, J]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Wu, R]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Putative outer membrane protein domain]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of putative outer membrane lipoprotein-sorting protein domain from Vibrio parahaemolyticus
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