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3bro
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="3bro" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bro, resolution 2.04Å" /> '''Crystal structure of...) |
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| - | [[Image:3bro.jpg|left|200px]]<br /><applet load="3bro" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="3bro, resolution 2.04Å" /> | ||
| - | '''Crystal structure of the transcription regulator MarR from Oenococcus oeni PSU-1'''<br /> | ||
| - | == | + | ==Crystal structure of the transcription regulator MarR from Oenococcus oeni PSU-1== |
| - | + | <StructureSection load='3bro' size='340' side='right'caption='[[3bro]], [[Resolution|resolution]] 2.04Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[3bro]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Oenob Oenob]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BRO FirstGlance]. <br> | |
| - | [ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| - | [[ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OEOE_1854 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=203123 OENOB])</td></tr> |
| - | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bro FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bro OCA], [https://pdbe.org/3bro PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bro RCSB], [https://www.ebi.ac.uk/pdbsum/3bro PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bro ProSAT], [https://www.topsan.org/Proteins/MCSG/3bro TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/3bro_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bro ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | + | [[Category: Oenob]] | |
| - | + | [[Category: Gu, M]] | |
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kim, Y]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Volkart, L]] | ||
| + | [[Category: Dna-binding]] | ||
| + | [[Category: Helix_turn_helix]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Transcription]] | ||
| + | [[Category: Transcription regulation]] | ||
| + | [[Category: Transcription regulator]] | ||
Current revision
Crystal structure of the transcription regulator MarR from Oenococcus oeni PSU-1
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