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3bwg

From Proteopedia

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[[Image:3bwg.jpg|left|200px]]
 
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{{Structure
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==The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168==
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|PDB= 3bwg |SIZE=350|CAPTION= <scene name='initialview01'>3bwg</scene>, resolution 2.09&Aring;
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<StructureSection load='3bwg' size='340' side='right'caption='[[3bwg]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[3bwg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BWG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BWG FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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|GENE= yydK, BSU40130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 Bacillus subtilis subsp. subtilis str. 168])
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yydK, BSU40130 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
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|RELATEDENTRY=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bwg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bwg OCA], [https://pdbe.org/3bwg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bwg RCSB], [https://www.ebi.ac.uk/pdbsum/3bwg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bwg ProSAT], [https://www.topsan.org/Proteins/MCSG/3bwg TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bwg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bwg OCA], [http://www.ebi.ac.uk/pdbsum/3bwg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bwg RCSB]</span>
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</table>
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/3bwg_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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3BWG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BWG OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Bacillus subtilis subsp. subtilis str. 168]]
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bwg ConSurf].
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[[Category: Abdullah, J.]]
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<div style="clear:both"></div>
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[[Category: Joachimiak, A.]]
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__TOC__
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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</StructureSection>
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[[Category: Tan, K.]]
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[[Category: Bacsu]]
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[[Category: Zhou, M.]]
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[[Category: Large Structures]]
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[[Category: apc85486]]
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[[Category: Abdullah, J]]
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[[Category: dna-binding]]
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[[Category: Joachimiak, A]]
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[[Category: mcsg]]
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[[Category: Structural genomic]]
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[[Category: midwest center for structural genomic]]
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[[Category: Tan, K]]
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[[Category: protein structure initiative]]
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[[Category: Zhou, M]]
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[[Category: psi-2]]
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[[Category: Apc85486]]
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[[Category: structural genomic]]
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[[Category: Dna-binding]]
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[[Category: transcription regulation]]
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[[Category: Mcsg]]
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[[Category: transcription regulator]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: transcriptional regulator]]
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[[Category: Transcription regulation]]
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[[Category: yydk]]
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[[Category: Transcription regulator]]
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[[Category: Transcriptional regulator]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:29:21 2008''
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[[Category: Yydk]]

Current revision

The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168

PDB ID 3bwg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

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