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Test Interactivity

From Proteopedia

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(New page: ==Your Heading Here (maybe something like 'Structure')== <StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''> This is a default text for you...)
Current revision (20:02, 19 January 2022) (edit) (undo)
 
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==Your Heading Here (maybe something like 'Structure')==
==Your Heading Here (maybe something like 'Structure')==
-
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
+
<StructureSection load='1eve' size='340' side='right' caption='1eve' scene='90/902041/Protein_and_ligand/2'>
This is a default text for your page '''Test Interactivity'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
This is a default text for your page '''Test Interactivity'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
== Function ==
== Function ==
 +
To show ligand(s), click on the sun symbol in the parentheses (<jmol>
 +
<jmolLink>
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<script> select E20; selectionHalos ON;
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delay 0.5; selectionHalos OFF;</script>
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<text>☼</text>
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</jmolLink>
 +
</jmol>)
 +
 +
<jmol>
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<jmolLink>
 +
<script>
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define current selected;
 +
select E20;
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selectionHalos on;
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delay 0.5;
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selectionHalos off;
 +
select current;
 +
</script>
 +
<text>on/off</text>
 +
</jmolLink>
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</jmol>
 +
 +
 +
<jmol>
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<jmolCheckbox>
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<scriptWhenUnChecked>hide E20 or hidden
 +
</scriptWhenUnChecked>
 +
<scriptWhenchecked>hide hidden and not (E20)
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</scriptWhenchecked>
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<checked>true</checked>
 +
<text>ligand</text>
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</jmolCheckbox>
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</jmol>
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 +
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<jmol>
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<jmolRadioGroup>
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<item>
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<script>select sidechain; spacefill off;
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select sidechain and 84; spacefill on; color magenta</script>
 +
<text>Residue 84</text>
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<checked>false</checked>
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</item>
 +
<item>
 +
<script>select sidechain; spacefill off;
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select sidechain and 330; spacefill on; color magenta</script>
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<text>Residue 330</text>
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<checked>false</checked>
 +
</item>
 +
<item>
 +
<script>select sidechain; spacefill off</script>
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<text>No side chains</text>
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<checked>true</checked>
 +
</item>
 +
</jmolRadioGroup>
 +
</jmol>
 +
== Disease ==
== Disease ==

Current revision

Your Heading Here (maybe something like 'Structure')

1eve

Drag the structure with the mouse to rotate

References

  1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

Proteopedia Page Contributors and Editors (what is this?)

Joel L. Sussman

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