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3c2q

From Proteopedia

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[[Image:3c2q.jpg|left|200px]]<br /><applet load="3c2q" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="3c2q, resolution 2.00&Aring;" />
 
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'''Crystal structure of conserved putative LOR/SDH protein from Methanococcus maripaludis S2'''<br />
 
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==About this Structure==
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==Crystal structure of conserved putative LOR/SDH protein from Methanococcus maripaludis S2==
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3C2Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Methanococcus_maripaludis_s2 Methanococcus maripaludis s2] with <scene name='pdbligand=NI:'>NI</scene> and <scene name='pdbligand=IMD:'>IMD</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Ni+Binding+Site+For+Residue+A+500'>AC1</scene>, <scene name='pdbsite=AC2:Imd+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:Imd+Binding+Site+For+Residue+B+502'>AC3</scene>, <scene name='pdbsite=AC4:Imd+Binding+Site+For+Residue+A+502'>AC4</scene> and <scene name='pdbsite=AC5:Imd+Binding+Site+For+Residue+B+503'>AC5</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2Q OCA].
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<StructureSection load='3c2q' size='340' side='right'caption='[[3c2q]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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[[Category: Methanococcus maripaludis s2]]
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== Structural highlights ==
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[[Category: Single protein]]
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<table><tr><td colspan='2'>[[3c2q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Metmp Metmp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2Q FirstGlance]. <br>
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[[Category: Conrad, B.]]
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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[[Category: Duke, N.]]
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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[[Category: Gu, M.]]
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MMP1218, gi:45047647 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=267377 METMP])</td></tr>
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[[Category: Joachimiak, A.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2q OCA], [https://pdbe.org/3c2q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2q RCSB], [https://www.ebi.ac.uk/pdbsum/3c2q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2q ProSAT], [https://www.topsan.org/Proteins/MCSG/3c2q TOPSAN]</span></td></tr>
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[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
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</table>
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[[Category: Mulligan, R.]]
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== Evolutionary Conservation ==
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[[Category: IMD]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: NI]]
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Check<jmol>
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[[Category: mcsg]]
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<jmolCheckbox>
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[[Category: midwest center for structural genomics]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c2q_consurf.spt"</scriptWhenChecked>
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[[Category: protein structure initiative]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: psi-2]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: putative lor/sdh]]
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</jmolCheckbox>
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[[Category: structural genomics]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c2q ConSurf].
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[[Category: unknown function]]
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<div style="clear:both"></div>
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__TOC__
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 6 17:27:23 2008''
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Metmp]]
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[[Category: Conrad, B]]
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[[Category: Duke, N]]
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[[Category: Gu, M]]
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[[Category: Joachimiak, A]]
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[[Category: Structural genomic]]
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[[Category: Mulligan, R]]
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[[Category: Mcsg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Putative lor/sdh]]
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[[Category: Unknown function]]

Current revision

Crystal structure of conserved putative LOR/SDH protein from Methanococcus maripaludis S2

PDB ID 3c2q

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