This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c37

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:41, 27 January 2022) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3c37.png|left|200px]]
 
-
<!--
+
==X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A==
-
The line below this paragraph, containing "STRUCTURE_3c37", creates the "Structure Box" on the page.
+
<StructureSection load='3c37' size='340' side='right'caption='[[3c37]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3c37]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geosl Geosl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C37 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3c37| PDB=3c37 | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU1437 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243231 GEOSL])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c37 OCA], [https://pdbe.org/3c37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c37 RCSB], [https://www.ebi.ac.uk/pdbsum/3c37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c37 ProSAT], [https://www.topsan.org/Proteins/NESGC/3c37 TOPSAN]</span></td></tr>
-
===X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3C37 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens_pca Geobacter sulfurreducens pca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA].
+
<jmolCheckbox>
-
[[Category: Geobacter sulfurreducens pca]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/3c37_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c37 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Geosl]]
 +
[[Category: Large Structures]]
 +
[[Category: Acton, T B]]
 +
[[Category: Baran, M C]]
 +
[[Category: Chen, Y]]
 +
[[Category: Forouhar, F]]
 +
[[Category: Hunt, J F]]
 +
[[Category: Kuzin, A P]]
 +
[[Category: Liu, J]]
 +
[[Category: Maglaqui, M]]
 +
[[Category: Mao, L]]
 +
[[Category: Montelione, G T]]
 +
[[Category: Structural genomic]]
 +
[[Category: Rost, B]]
 +
[[Category: Seetharaman, J]]
 +
[[Category: Tong, L]]
 +
[[Category: Vorobiev, S M]]
 +
[[Category: Wang, D]]
 +
[[Category: Xiao, R]]
[[Category: Gsr143a]]
[[Category: Gsr143a]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
Line 23: Line 45:
[[Category: Metalloprotease]]
[[Category: Metalloprotease]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
 
[[Category: Peptidase]]
[[Category: Peptidase]]
[[Category: Protease]]
[[Category: Protease]]
-
[[Category: Protein structure initiative]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Psi-2]]
+
[[Category: Q74d82]]
[[Category: Q74d82]]
-
[[Category: Structural genomic]]
 
-
[[Category: X-ray]]
 
-
[[Category: Zinc]]
 
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 4 20:26:57 2009''
 

Current revision

X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A

PDB ID 3c37

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools