3c4a
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="3c4a" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c4a" /> ''''''<br /> ==About this Structure== is a [h...) |
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| - | [[Image:3c4a.jpg|left|200px]]<br /><applet load="3c4a" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="3c4a" /> | ||
| - | ''''''<br /> | ||
| - | == | + | ==Crystal structure of vioD hydroxylase in complex with FAD from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR158== |
| - | + | <StructureSection load='3c4a' size='340' side='right'caption='[[3c4a]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[3c4a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chrvo Chrvo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C4A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C4A FirstGlance]. <br> | |
| - | '' | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> |
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">vioD, CV_3271 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243365 CHRVO])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c4a OCA], [https://pdbe.org/3c4a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c4a RCSB], [https://www.ebi.ac.uk/pdbsum/3c4a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c4a ProSAT], [https://www.topsan.org/Proteins/NESGC/3c4a TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c4/3c4a_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c4a ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Chrvo]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Baran, M C]] | ||
| + | [[Category: Forouhar, F]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Janjua, H]] | ||
| + | [[Category: Maglaqui, M]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Neely, H]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Wang, H]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: Alpha-beta protein]] | ||
| + | [[Category: Antibiotic biosynthesis]] | ||
| + | [[Category: Fad]] | ||
| + | [[Category: Flavoprotein]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
Current revision
Crystal structure of vioD hydroxylase in complex with FAD from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR158
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Categories: Chrvo | Large Structures | Acton, T B | Baran, M C | Forouhar, F | Hunt, J F | Janjua, H | Maglaqui, M | Montelione, G T | Structural genomic | Neely, H | Seetharaman, J | Tong, L | Wang, H | Xiao, R | Alpha-beta protein | Antibiotic biosynthesis | Fad | Flavoprotein | Nesg | Oxidoreductase | PSI, Protein structure initiative
