This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c8c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:46, 27 January 2022) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c8c.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of Mcp_N and cache domains of methyl-accepting chemotaxis protein from Vibrio cholerae==
-
|PDB= 3c8c |SIZE=350|CAPTION= <scene name='initialview01'>3c8c</scene>, resolution 1.50&Aring;
+
<StructureSection load='3c8c' size='340' side='right'caption='[[3c8c]]' scene=''>
-
|SITE= <scene name='pdbsite=AC1:Mg+Binding+Site+For+Residue+B+501'>AC1</scene> and <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+A+501'>AC2</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C8C FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c8c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c8c OCA], [https://pdbe.org/3c8c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c8c RCSB], [https://www.ebi.ac.uk/pdbsum/3c8c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c8c ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3c8c TOPSAN]</span></td></tr>
-
|GENE= VCA0923 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 Vibrio cholerae O1 biovar eltor str. N16961])
+
</table>
-
|DOMAIN=
+
== Evolutionary Conservation ==
-
|RELATEDENTRY=
+
[[Image:Consurf_key_small.gif|200px|right]]
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c8c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c8c OCA], [http://www.ebi.ac.uk/pdbsum/3c8c PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c8c RCSB]</span>
+
Check<jmol>
-
}}
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/3c8c_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c8c ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of Mcp_N and cache domains of methyl-accepting chemotaxis protein from Vibrio cholerae'''
+
==See Also==
-
 
+
*[[Chemotaxis protein 3D structures|Chemotaxis protein 3D structures]]
-
 
+
*[[Methyl-accepting chemotaxis protein|Methyl-accepting chemotaxis protein]]
-
==About this Structure==
+
__TOC__
-
3C8C is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_eltor_str._n16961 Vibrio cholerae o1 biovar eltor str. n16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8C OCA].
+
</StructureSection>
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Vibrio cholerae o1 biovar eltor str. n16961]]
+
[[Category: Almo SC]]
-
[[Category: Almo, S C.]]
+
[[Category: Burley SK]]
-
[[Category: Burley, S K.]]
+
[[Category: Freeman J]]
-
[[Category: Freeman, J.]]
+
[[Category: Hu S]]
-
[[Category: Hu, S.]]
+
[[Category: Ozyurt S]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Patskovsky Y]]
-
[[Category: Ozyurt, S.]]
+
[[Category: Sauder JM]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Smith D]]
-
[[Category: Sauder, J M.]]
+
[[Category: Wasserman SR]]
-
[[Category: Smith, D.]]
+
-
[[Category: Wasserman, S R.]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: predicted chemotaxis protein]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: uncharacterized protein]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:31:05 2008''
+

Current revision

Crystal structure of Mcp_N and cache domains of methyl-accepting chemotaxis protein from Vibrio cholerae

PDB ID 3c8c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools