This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Proline utilization A

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:15, 1 February 2022) (edit) (undo)
 
Line 15: Line 15:
**[[4nm9]] – GsPutA + FAD – ''Geobacter sulfurreducens'' <br />
**[[4nm9]] – GsPutA + FAD – ''Geobacter sulfurreducens'' <br />
 +
**[[7na0]] – GsPutA (mutant) + FAD <br />
**[[4nma]] – GsPutA + FAD + tetrahydrofuran derivative <br />
**[[4nma]] – GsPutA + FAD + tetrahydrofuran derivative <br />
**[[2gpe]] – EcPutA DNA-binding domain <br />
**[[2gpe]] – EcPutA DNA-binding domain <br />
**[[2ay0]] – EcPutA DNA-binding domain (mutant)<br />
**[[2ay0]] – EcPutA DNA-binding domain (mutant)<br />
-
**[[4q71]], [[4q72]], [[4q73]] – PutA (mutant) + FAD – ''Bradyrhizobium diazoefficiens''<br />
+
**[[4q71]], [[4q72]], [[4q73]] – BdPutA (mutant) + FAD – ''Bradyrhizobium diazoefficiens''<br />
**[[4h6r]] – DrPutA + FAD – ''Deinococcus radiodurans''<br />
**[[4h6r]] – DrPutA + FAD – ''Deinococcus radiodurans''<br />
**[[2gpe]] - EcPutA DNA-binding domain - ''Escherichia coli''<br />
**[[2gpe]] - EcPutA DNA-binding domain - ''Escherichia coli''<br />
**[[2jxg]], [[2jxh]] - PpPutA DNA-binding domain - ''Pseudomonas putida'' - NMR<br />
**[[2jxg]], [[2jxh]] - PpPutA DNA-binding domain - ''Pseudomonas putida'' - NMR<br />
 +
**[[6ufp]], [[6vz9]] – SmPutA (mutant) + FAD – ''Sinorhizobium melioli''<br />
*PutA complex
*PutA complex
-
**[[6bsn]] – hPutA + FAD derivative + Pro - human<br />
 
**[[4nmb]] – GsPutA + FAD + lactate <br />
**[[4nmb]] – GsPutA + FAD + lactate <br />
**[[4nmc]] – GsPutA + FAD + zwittergent <br />
**[[4nmc]] – GsPutA + FAD + zwittergent <br />
Line 47: Line 48:
**[[2jxi]] - PpPutA DNA-binding domain + DNA<br />
**[[2jxi]] - PpPutA DNA-binding domain + DNA<br />
**[[5ur2]] - PutA + FAD derivative + inhibitor - ''Bdellovibrio bacteriovorus''<br />
**[[5ur2]] - PutA + FAD derivative + inhibitor - ''Bdellovibrio bacteriovorus''<br />
 +
**[[6x9a]], [[6x9b]], [[6x9c]], [[6x9d]] – SmPutA + FAD + proline derivative <br />
 +
**[[6x99]] – SmPutA + FAD + Glu derivative <br />
 +
**[[7my9]], [[7mya]], [[7myb]], [[7myc]] – SmPutA + FAD + dithiolane <br />
 +
**[[6bsn]] – BdPutA + FAD + proline<br />
}}
}}

Current revision

E. coli PutA proline dehydrogenase domain with cofactor FAD complex with hydroxyproline (PDB code 3e2q)

Drag the structure with the mouse to rotate

3D Structures of proline utilization A

Updated on 01-February-2022

References

  1. ↑ Srivastava D, Zhu W, Johnson WH, Whitman CP, Becker DF, Tanner JJ. The Structure of the Proline Utilization A Proline Dehydrogenase Domain Inactivated by N-Propargylglycine Provides Insight into Conformational Changes Induced by Substrate Binding and Flavin Reduction (,). Biochemistry. 2009 Dec 29. PMID:19994913 doi:10.1021/bi901717s
  2. ↑ Ostrander EL, Larson JD, Schuermann JP, Tanner JJ. A Conserved Active Site Tyrosine Residue of Proline Dehydrogenase Helps Enforce the Preference for Proline over Hydroxyproline as the Substrate (dagger) (double dagger). Biochemistry. 2009 Feb 10;48(5):951-9. PMID:19140736 doi:10.1021/bi802094k

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Retrieved from "http://52.214.119.220/wiki/index.php/Proline_utilization_A"
Personal tools