This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cwi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:47, 2 February 2022) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cwi.png|left|200px]]
 
-
<!--
+
==Crystal structure of thiamine biosynthesis protein (ThiS) from Geobacter metallireducens. Northeast Structural Genomics Consortium Target GmR137==
-
The line below this paragraph, containing "STRUCTURE_3cwi", creates the "Structure Box" on the page.
+
<StructureSection load='3cwi' size='340' side='right'caption='[[3cwi]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cwi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geomg Geomg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CWI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CWI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ThiS, Gmet_1567 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269799 GEOMG])</td></tr>
-
{{STRUCTURE_3cwi| PDB=3cwi | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cwi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cwi OCA], [https://pdbe.org/3cwi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cwi RCSB], [https://www.ebi.ac.uk/pdbsum/3cwi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cwi ProSAT], [https://www.topsan.org/Proteins/NESGC/3cwi TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of thiamine biosynthesis protein (ThiS) from Geobacter metallireducens. Northeast Structural Genomics Consortium Target GmR137===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3CWI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CWI OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/3cwi_consurf.spt"</scriptWhenChecked>
-
[[Category: Bacteria]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Abashidze, M.]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cwi ConSurf].
-
[[Category: Ciccosanti, C.]]
+
<div style="clear:both"></div>
-
[[Category: Everett, J K.]]
+
__TOC__
-
[[Category: Foote, E L.]]
+
</StructureSection>
-
[[Category: Forouhar, F.]]
+
[[Category: Geomg]]
-
[[Category: Hunt, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Janjua, H.]]
+
[[Category: Abashidze, M]]
-
[[Category: Maglaqui, M.]]
+
[[Category: Acton, T B]]
-
[[Category: Mao, L.]]
+
[[Category: Ciccosanti, C]]
-
[[Category: Montelione, G T.]]
+
[[Category: Everett, J K]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Foote, E L]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Forouhar, F]]
-
[[Category: Tong, L.]]
+
[[Category: Hunt, J F]]
-
[[Category: Wang, H.]]
+
[[Category: Janjua, H]]
-
[[Category: Xiao, R.]]
+
[[Category: Maglaqui, M]]
 +
[[Category: Mao, L]]
 +
[[Category: Montelione, G T]]
 +
[[Category: Structural genomic]]
 +
[[Category: Seetharaman, J]]
 +
[[Category: Tong, L]]
 +
[[Category: Wang, H]]
 +
[[Category: Xiao, R]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Biosynthetic protein]]
[[Category: Biosynthetic protein]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:36:45 2008''
+

Current revision

Crystal structure of thiamine biosynthesis protein (ThiS) from Geobacter metallireducens. Northeast Structural Genomics Consortium Target GmR137

PDB ID 3cwi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3cwi"
Personal tools