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3d0f
From Proteopedia
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| - | [[Image:3d0f.png|left|200px]] | ||
| - | + | ==Structure of the BIG_1156.2 domain of putative penicillin-binding protein MrcA from Nitrosomonas europaea ATCC 19718== | |
| - | + | <StructureSection load='3d0f' size='340' side='right'caption='[[3d0f]], [[Resolution|resolution]] 1.64Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3d0f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Niteu Niteu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0F FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[3d0f]] is a 2 chain structure with sequence from [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mrcA, NE2317 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=228410 NITEU])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0f OCA], [https://pdbe.org/3d0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0f RCSB], [https://www.ebi.ac.uk/pdbsum/3d0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0f ProSAT], [https://www.topsan.org/Proteins/MCSG/3d0f TOPSAN]</span></td></tr> |
| - | [[Category: Clancy, S | + | </table> |
| - | [[Category: Cuff, M E | + | == Evolutionary Conservation == |
| - | [[Category: Joachimiak, A | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: Mulligan, R | + | <jmolCheckbox> |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0f_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0f ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Niteu]] | ||
| + | [[Category: Clancy, S]] | ||
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Mulligan, R]] | ||
[[Category: Big_1156 2]] | [[Category: Big_1156 2]] | ||
[[Category: Cell shape]] | [[Category: Cell shape]] | ||
| Line 19: | Line 33: | ||
[[Category: Glycosyltransferase]] | [[Category: Glycosyltransferase]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Nitrosomonas europaea]] | [[Category: Nitrosomonas europaea]] | ||
[[Category: Penicillin-binding 1]] | [[Category: Penicillin-binding 1]] | ||
[[Category: Peptidoglycan synthesis]] | [[Category: Peptidoglycan synthesis]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
[[Category: Transmembrane]] | [[Category: Transmembrane]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
Structure of the BIG_1156.2 domain of putative penicillin-binding protein MrcA from Nitrosomonas europaea ATCC 19718
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Categories: Large Structures | Niteu | Clancy, S | Cuff, M E | Joachimiak, A | Structural genomic | Mulligan, R | Big 1156 2 | Cell shape | Cell wall biogenesis/degradation | Glycosyltransferase | Mcsg | Nitrosomonas europaea | Penicillin-binding 1 | Peptidoglycan synthesis | PSI, Protein structure initiative | Transferase | Transmembrane | Unknown function
