3d6b
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==2.2 A crystal structure of glutaryl-CoA dehydrogenase from Burkholderia pseudomallei== | ==2.2 A crystal structure of glutaryl-CoA dehydrogenase from Burkholderia pseudomallei== | ||
- | <StructureSection load='3d6b' size='340' side='right' caption='[[3d6b]], [[Resolution|resolution]] 2.21Å' scene=''> | + | <StructureSection load='3d6b' size='340' side='right'caption='[[3d6b]], [[Resolution|resolution]] 2.21Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3d6b]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3d6b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Burp1 Burp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D6B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D6B FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=54D:METHYL+THIOPHENE-2-CARBOXYLATE'>54D</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=54D:METHYL+THIOPHENE-2-CARBOXYLATE'>54D</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BURPS1710b_3237 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BURPS1710b_3237 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glutaryl-CoA_dehydrogenase_(ETF) Glutaryl-CoA dehydrogenase (ETF)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.8.6 1.3.8.6] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d6b OCA], [https://pdbe.org/3d6b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d6b RCSB], [https://www.ebi.ac.uk/pdbsum/3d6b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d6b ProSAT], [https://www.topsan.org/Proteins/SSGCID/3d6b TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
Line 13: | Line 13: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d6/3d6b_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d6/3d6b_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Line 28: | Line 28: | ||
</div> | </div> | ||
<div class="pdbe-citations 3d6b" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3d6b" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]] | ||
+ | *[[Glutaryl-CoA dehydrogenase|Glutaryl-CoA dehydrogenase]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Line 33: | Line 37: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Burp1]] | [[Category: Burp1]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Burkholderia]] | [[Category: Burkholderia]] |
Revision as of 07:54, 2 February 2022
2.2 A crystal structure of glutaryl-CoA dehydrogenase from Burkholderia pseudomallei
|