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3db5

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{{Seed}}
 
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[[Image:3db5.jpg|left|200px]]
 
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==Crystal structure of methyltransferase domain of human PR domain-containing protein 4==
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The line below this paragraph, containing "STRUCTURE_3db5", creates the "Structure Box" on the page.
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<StructureSection load='3db5' size='340' side='right'caption='[[3db5]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3db5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DB5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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-->
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRDM4, PFM1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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{{STRUCTURE_3db5| PDB=3db5 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3db5 OCA], [https://pdbe.org/3db5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3db5 RCSB], [https://www.ebi.ac.uk/pdbsum/3db5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3db5 ProSAT]</span></td></tr>
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</table>
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===Crystal structure of methyltransferase domain of human PR domain-containing protein 4===
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== Function ==
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[[https://www.uniprot.org/uniprot/PRDM4_HUMAN PRDM4_HUMAN]] May function as a transcription factor involved in cell differentiation.
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3DB5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB5 OCA].
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Check<jmol>
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[[Category: Homo sapiens]]
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<jmolCheckbox>
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[[Category: Single protein]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3db5_consurf.spt"</scriptWhenChecked>
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[[Category: Amaya, M F.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Arrowsmith, C H.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Bochkarev, A.]]
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</jmolCheckbox>
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[[Category: Bountra, C.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3db5 ConSurf].
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[[Category: Edwards, A M.]]
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<div style="clear:both"></div>
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[[Category: Loppnau, P.]]
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__TOC__
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[[Category: Min, J.]]
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</StructureSection>
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[[Category: Plotnikov, A N.]]
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[[Category: Human]]
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[[Category: SGC, Structural Genomics Consortium.]]
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[[Category: Large Structures]]
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[[Category: Weigelt, J.]]
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[[Category: Amaya, M F]]
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[[Category: Wu, H.]]
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[[Category: Arrowsmith, C H]]
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[[Category: Zeng, H.]]
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[[Category: Bochkarev, A]]
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[[Category: Bountra, C]]
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[[Category: Edwards, A M]]
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[[Category: Loppnau, P]]
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[[Category: Min, J]]
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[[Category: Plotnikov, A N]]
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[[Category: Structural genomic]]
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[[Category: Weigelt, J]]
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[[Category: Wu, H]]
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[[Category: Zeng, H]]
[[Category: Dna-binding]]
[[Category: Dna-binding]]
[[Category: Metal-binding]]
[[Category: Metal-binding]]
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[[Category: Prdm4]]
[[Category: Prdm4]]
[[Category: Sgc]]
[[Category: Sgc]]
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[[Category: Structural genomic]]
 
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[[Category: Structural genomics consortium]]
 
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulation]]
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[[Category: Zinc]]
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[[Category: Transferase]]
[[Category: Zinc-finger]]
[[Category: Zinc-finger]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 13 14:36:24 2008''
 

Current revision

Crystal structure of methyltransferase domain of human PR domain-containing protein 4

PDB ID 3db5

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