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3dbi

From Proteopedia

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(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3dbi", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
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[[Image:3dbi.jpg|left|200px]]
 
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==CRYSTAL STRUCTURE OF SUGAR-BINDING TRANSCRIPTIONAL REGULATOR (LACI FAMILY) FROM ESCHERICHIA COLI COMPLEXED WITH PHOSPHATE==
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The line below this paragraph, containing "STRUCTURE_3dbi", creates the "Structure Box" on the page.
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<StructureSection load='3dbi' size='340' side='right'caption='[[3dbi]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DBI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbi OCA], [https://pdbe.org/3dbi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dbi RCSB], [https://www.ebi.ac.uk/pdbsum/3dbi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbi ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3dbi TOPSAN]</span></td></tr>
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</table>
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{{STRUCTURE_3dbi| PDB=3dbi | SCENE= }}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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===CRYSTAL STRUCTURE OF SUGAR-BINDING TRANSCRIPTIONAL REGULATOR (LACI FAMILY) FROM ESCHERICHIA COLI COMPLEXED WITH PHOSPHATE===
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dbi_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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3DBI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBI OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Escherichia coli k12]]
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dbi ConSurf].
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[[Category: Almo, S C.]]
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<div style="clear:both"></div>
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[[Category: Burley, S K.]]
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__TOC__
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[[Category: Freeman, J.]]
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</StructureSection>
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[[Category: Koss, J.]]
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[[Category: Large Structures]]
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[[Category: Maletic, M.]]
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[[Category: Almo SC]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Burley SK]]
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[[Category: Ozyurt, S.]]
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[[Category: Freeman J]]
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[[Category: Patskovsky, Y.]]
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[[Category: Koss J]]
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[[Category: Sauder, J M.]]
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[[Category: Maletic M]]
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[[Category: Wasserman, S R.]]
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[[Category: Ozyurt S]]
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[[Category: Wu, B.]]
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[[Category: Patskovsky Y]]
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[[Category: Dna-binding]]
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[[Category: Sauder JM]]
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[[Category: New york structural genomix research consortium]]
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[[Category: Wasserman SR]]
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[[Category: Nysgxrc]]
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[[Category: Wu B]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Repressor]]
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[[Category: Structural genomic]]
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[[Category: Sugar-binding transcriptional regulator]]
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[[Category: Transcription]]
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[[Category: Transcription regulation]]
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[[Category: Transcription regulator]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul 3 11:33:51 2008''
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Current revision

CRYSTAL STRUCTURE OF SUGAR-BINDING TRANSCRIPTIONAL REGULATOR (LACI FAMILY) FROM ESCHERICHIA COLI COMPLEXED WITH PHOSPHATE

PDB ID 3dbi

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