This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7ntn
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | The | + | ==The structure of RRM domain of human TRMT2A at 2 A resolution== |
| + | <StructureSection load='7ntn' size='340' side='right'caption='[[7ntn]], [[Resolution|resolution]] 2.02Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[7ntn]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NTN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NTN FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ntn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ntn OCA], [https://pdbe.org/7ntn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ntn RCSB], [https://www.ebi.ac.uk/pdbsum/7ntn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ntn ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/TRM2A_HUMAN TRM2A_HUMAN]] May be involved in nucleic acid metabolism and/or modifications. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Polyglutamine (polyQ) diseases are characterized by an expansion of cytosine-adenine-guanine (CAG) trinucleotide repeats encoding for an uninterrupted prolonged polyQ tract. We previously identified TRMT2A as a strong modifier of polyQ-induced toxicity in an unbiased large-scale screen in Drosophila melanogaster. This work aimed at identifying and validating pharmacological TRMT2A inhibitors as treatment opportunities for polyQ diseases in humans. Computer-aided drug discovery was implemented to identify human TRMT2A inhibitors. Additionally, the crystal structure of one protein domain, the RNA recognition motif (RRM), was determined, and Biacore experiments with the RRM were performed. The identified molecules were validated for their potency to reduce polyQ aggregation and polyQ-induced cell death in human HEK293T cells and patient derived fibroblasts. Our work provides a first step towards pharmacological inhibition of this enzyme and indicates TRMT2A as a viable drug target for polyQ diseases. | ||
| - | + | Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.,Margreiter MA, Witzenberger M, Wasser Y, Davydova E, Janowski R, Metz J, Habib P, Sahnoun SEM, Sobisch C, Poma B, Palomino-Hernandez O, Wagner M, Carell T, Jon Shah N, Schulz JB, Niessing D, Voigt A, Rossetti G Comput Struct Biotechnol J. 2021 Dec 28;20:443-458. doi:, 10.1016/j.csbj.2021.12.029. eCollection 2022. PMID:35070167<ref>PMID:35070167</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 7ntn" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Davydova, E]] | [[Category: Davydova, E]] | ||
| + | [[Category: Janowski, R]] | ||
[[Category: Niessing, D]] | [[Category: Niessing, D]] | ||
[[Category: Witzenberger, M]] | [[Category: Witzenberger, M]] | ||
| - | [[Category: | + | [[Category: Methyltransferase]] |
| + | [[Category: Polyq aggregation]] | ||
| + | [[Category: Transferase]] | ||
| + | [[Category: Trmt2a]] | ||
| + | [[Category: Trna binding]] | ||
Current revision
The structure of RRM domain of human TRMT2A at 2 A resolution
| |||||||||||
