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3dew
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3dew is ON HOLD Authors: Cuff, M.E., Bigelow, L., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: The stru...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.== | |
| - | + | <StructureSection load='3dew' size='340' side='right'caption='[[3dew]], [[Resolution|resolution]] 1.75Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dew]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_51573 Atcc 51573]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DEW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DEW FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | '' | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU0175 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=35554 ATCC 51573])</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dew FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dew OCA], [https://pdbe.org/3dew PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dew RCSB], [https://www.ebi.ac.uk/pdbsum/3dew PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dew ProSAT], [https://www.topsan.org/Proteins/MCSG/3dew TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/3dew_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dew ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Atcc 51573]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Abdullah, J]] | ||
| + | [[Category: Bigelow, L]] | ||
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Dna-binding]] | ||
| + | [[Category: Geobacter sulfurreducen]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Tetr]] | ||
| + | [[Category: Transcription]] | ||
| + | [[Category: Transcription regulation]] | ||
| + | [[Category: Transcription regulator]] | ||
| + | [[Category: Transcriptional regulator]] | ||
Current revision
The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.
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Categories: Atcc 51573 | Large Structures | Abdullah, J | Bigelow, L | Cuff, M E | Joachimiak, A | Structural genomic | Dna-binding | Geobacter sulfurreducen | Mcsg | PSI, Protein structure initiative | Tetr | Transcription | Transcription regulation | Transcription regulator | Transcriptional regulator
