This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3dl3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:01, 9 February 2022) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3dl3 is ON HOLD until Aug 21 2009
+
==Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 .==
-
 
+
<StructureSection load='3dl3' size='340' side='right'caption='[[3dl3]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
Authors: Kuzin, A.P., Su, M., Seetharaman, J., Wang, D., Mao, L., Maglaqui, M., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3dl3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aliivibrio_fischeri_es114 Aliivibrio fischeri es114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DL3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DL3 FirstGlance]. <br>
-
Description: Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 (CASP Target).
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tehB, VF_1779 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=312309 Aliivibrio fischeri ES114])</td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 23 12:14:35 2008''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dl3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dl3 OCA], [https://pdbe.org/3dl3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dl3 RCSB], [https://www.ebi.ac.uk/pdbsum/3dl3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dl3 ProSAT], [https://www.topsan.org/Proteins/NESGC/3dl3 TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/3dl3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dl3 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Aliivibrio fischeri es114]]
 +
[[Category: Large Structures]]
 +
[[Category: Acton, T B]]
 +
[[Category: Baran, M C]]
 +
[[Category: Hunt, J F]]
 +
[[Category: Kuzin, A P]]
 +
[[Category: Liu, J]]
 +
[[Category: Maglaqui, M]]
 +
[[Category: Mao, L]]
 +
[[Category: Montelione, G T]]
 +
[[Category: Structural genomic]]
 +
[[Category: Rost, B]]
 +
[[Category: Seetharaman, J]]
 +
[[Category: Su, M]]
 +
[[Category: Tong, L]]
 +
[[Category: Wang, D]]
 +
[[Category: Xiao, R]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Unknown function]]
 +
[[Category: X-ray nesg vfr98 q5e3x2_vibf1]]

Current revision

Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 .

PDB ID 3dl3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools