This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3dns

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:03, 9 February 2022) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3dns is ON HOLD
+
==The N-terminal domain of Ribosomal-protein-alanine acetyltransferase from Clostridium acetobutylicum ATCC 824==
-
 
+
<StructureSection load='3dns' size='340' side='right'caption='[[3dns]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
Authors: Nocek, B., Hendricks, R., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3dns]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"clostridium_acetobutyricum"_prevot_1940 "clostridium acetobutyricum" prevot 1940]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNS FirstGlance]. <br>
-
Description: The N-terminal domain of Ribosomal-protein-alanine acetyltransferase from Clostridium acetobutylicum ATCC 824
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CA_C0152 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1488 "Clostridium acetobutyricum" Prevot 1940])</td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 23 12:15:39 2008''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dns FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dns OCA], [https://pdbe.org/3dns PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dns RCSB], [https://www.ebi.ac.uk/pdbsum/3dns PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dns ProSAT], [https://www.topsan.org/Proteins/MCSG/3dns TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/3dns_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dns ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Clostridium acetobutyricum prevot 1940]]
 +
[[Category: Large Structures]]
 +
[[Category: Cobb, G]]
 +
[[Category: Hendricks, R]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Nocek, B]]
 +
[[Category: Mcsg]]
 +
[[Category: N-terminal domain of ribosomal-protein-alanine acetyltransferase]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Ribosomal protein]]
 +
[[Category: Transferase]]

Current revision

The N-terminal domain of Ribosomal-protein-alanine acetyltransferase from Clostridium acetobutylicum ATCC 824

PDB ID 3dns

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools