This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3e0x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:12, 9 February 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3e0x.png|left|200px]]
 
-
{{STRUCTURE_3e0x| PDB=3e0x | SCENE= }}
+
==The crystal structure of a Lipase-esterase related protein from Clostridium acetobutylicum ATCC 824==
-
 
+
<StructureSection load='3e0x' size='340' side='right'caption='[[3e0x]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
-
===The crystal structure of a Lipase-esterase related protein from Clostridium acetobutylicum ATCC 824===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3e0x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"clostridium_acetobutyricum"_prevot_1940 "clostridium acetobutyricum" prevot 1940]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E0X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E0X FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OXE:ORTHO-XYLENE'>OXE</scene></td></tr>
-
==About this Structure==
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[3e0x]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E0X OCA].
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CA_C0816 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1488 "Clostridium acetobutyricum" Prevot 1940])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e0x OCA], [https://pdbe.org/3e0x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e0x RCSB], [https://www.ebi.ac.uk/pdbsum/3e0x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e0x ProSAT], [https://www.topsan.org/Proteins/MCSG/3e0x TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/3e0x_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e0x ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Lipase|Lipase]]
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
-
[[Category: Clostridium acetobutylicum]]
+
__TOC__
-
[[Category: Cobb, G.]]
+
</StructureSection>
-
[[Category: Joachimiak, A.]]
+
[[Category: Clostridium acetobutyricum prevot 1940]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Large Structures]]
-
[[Category: Sather, A.]]
+
[[Category: Cobb, G]]
-
[[Category: Tan, K.]]
+
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Sather, A]]
 +
[[Category: Tan, K]]
[[Category: Apc60309]]
[[Category: Apc60309]]
[[Category: Clostridium acetobutylicum atcc 824]]
[[Category: Clostridium acetobutylicum atcc 824]]
[[Category: Lipase-esterase related protein]]
[[Category: Lipase-esterase related protein]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Unknown function]]
[[Category: Unknown function]]

Current revision

The crystal structure of a Lipase-esterase related protein from Clostridium acetobutylicum ATCC 824

PDB ID 3e0x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools