This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7vq4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "7vq4" [edit=sysop:move=sysop])
Current revision (11:14, 16 February 2022) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 7vq4 is ON HOLD
+
==The apo-state AtALMT1 structure at pH 7.5(ALMT1apo/pH7.5)==
 +
<StructureSection load='7vq4' size='340' side='right'caption='[[7vq4]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[7vq4]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7VQ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7VQ4 FirstGlance]. <br>
 +
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7vq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7vq4 OCA], [https://pdbe.org/7vq4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7vq4 RCSB], [https://www.ebi.ac.uk/pdbsum/7vq4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7vq4 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/ALMT1_ARATH ALMT1_ARATH]] Malate transporter critical for aluminum tolerance. The STOP1 transcription factor is required for ALMT1 expression.<ref>PMID:16740662</ref> <ref>PMID:17885092</ref> <ref>PMID:18826429</ref> <ref>PMID:19321711</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The plant aluminum (Al)-activated malate transporter ALMT1 mediates the efflux of malate to chelate the Al in acidic soils and underlies the plant Al resistance. Here we present cryo-electron microscopy (cryo-EM) structures of Arabidopsis thaliana ALMT1 (AtALMT1) in the apo, malate-bound, and Al-bound states at neutral and/or acidic pH at up to 3.0 A resolution. The AtALMT1 dimer assembles an anion channel and each subunit contains six transmembrane helices (TMs) and six cytosolic alpha-helices. Two pairs of Arg residues are located in the center of the channel pore and contribute to malate recognition. Al binds at the extracellular side of AtALMT1 and induces conformational changes of the TM1-2 loop and the TM5-6 loop, resulting in the opening of the extracellular gate. These structures, along with electrophysiological measurements, molecular dynamic simulations, and mutagenesis study in Arabidopsis, elucidate the structural basis for Al-activated malate transport by ALMT1.
-
Authors: Wang, J.Q.
+
Structural basis of ALMT1-mediated aluminum resistance in Arabidopsis.,Wang J, Yu X, Ding ZJ, Zhang X, Luo Y, Xu X, Xie Y, Li X, Yuan T, Zheng SJ, Yang W, Guo J Cell Res. 2021 Nov 19. pii: 10.1038/s41422-021-00587-6. doi:, 10.1038/s41422-021-00587-6. PMID:34799726<ref>PMID:34799726</ref>
-
Description: The apo-state AtALMT1 structure at pH 7.5(ALMT1apo/pH7.5)
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Wang, J.Q]]
+
<div class="pdbe-citations 7vq4" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Wang, J Q]]
 +
[[Category: Almt1]]
 +
[[Category: Aluminum resistance]]
 +
[[Category: Malate transport]]
 +
[[Category: Transport protein]]

Current revision

The apo-state AtALMT1 structure at pH 7.5(ALMT1apo/pH7.5)

PDB ID 7vq4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools