This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3e48

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3e48" [edit=sysop:move=sysop])
Current revision (11:39, 16 February 2022) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3e48.png|left|200px]]
 
-
{{STRUCTURE_3e48| PDB=3e48 | SCENE= }}
+
==Crystal structure of a nucleoside-diphosphate-sugar epimerase (SAV0421) from Staphylococcus aureus, Northeast Structural Genomics Consortium Target ZR319==
-
 
+
<StructureSection load='3e48' size='340' side='right'caption='[[3e48]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===Crystal structure of a nucleoside-diphosphate-sugar epimerase (SAV0421) from Staphylococcus aureus, Northeast Structural Genomics Consortium Target ZR319===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3e48]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staam Staam]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E48 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E48 FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[3e48]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus Staphylococcus aureus subsp. aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E48 OCA].
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAV0421 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158878 STAAM])</td></tr>
-
[[Category: Staphylococcus aureus subsp. aureus]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e48 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e48 OCA], [https://pdbe.org/3e48 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e48 RCSB], [https://www.ebi.ac.uk/pdbsum/3e48 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e48 ProSAT], [https://www.topsan.org/Proteins/NESGC/3e48 TOPSAN]</span></td></tr>
-
[[Category: Abashidze, M.]]
+
</table>
-
[[Category: Acton, T B.]]
+
== Evolutionary Conservation ==
-
[[Category: Ciccosanti, C.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e4/3e48_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e48 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Staam]]
 +
[[Category: Abashidze, M]]
 +
[[Category: Acton, T B]]
 +
[[Category: Ciccosanti, C]]
[[Category: Everett, J K]]
[[Category: Everett, J K]]
[[Category: Foote, E L]]
[[Category: Foote, E L]]
-
[[Category: Forouhar, F.]]
+
[[Category: Forouhar, F]]
[[Category: Hunt, J F]]
[[Category: Hunt, J F]]
-
[[Category: Janjua, H.]]
+
[[Category: Janjua, H]]
-
[[Category: Mao, L.]]
+
[[Category: Mao, L]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione, G T]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Structural genomic]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Seetharaman, J]]
-
[[Category: Tong, L.]]
+
[[Category: Tong, L]]
-
[[Category: Tong, S.]]
+
[[Category: Tong, S]]
-
[[Category: Wang, D.]]
+
[[Category: Wang, D]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao, R]]
-
[[Category: Alpha-beta protein.]]
+
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Unknown function]]
[[Category: Unknown function]]

Current revision

Crystal structure of a nucleoside-diphosphate-sugar epimerase (SAV0421) from Staphylococcus aureus, Northeast Structural Genomics Consortium Target ZR319

PDB ID 3e48

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3e48"
Personal tools