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3e8t

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{{Seed}}
 
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[[Image:3e8t.png|left|200px]]
 
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==Crystal Structure of Epiphyas postvittana Takeout 1==
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The line below this paragraph, containing "STRUCTURE_3e8t", creates the "Structure Box" on the page.
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<StructureSection load='3e8t' size='340' side='right'caption='[[3e8t]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3e8t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Epipo Epipo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E8T FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UQ8:UBIQUINONE-8'>UQ8</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3e8w|3e8w]]</div></td></tr>
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{{STRUCTURE_3e8t| PDB=3e8t | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">takeout-like 1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=65032 EPIPO])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e8t OCA], [https://pdbe.org/3e8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e8t RCSB], [https://www.ebi.ac.uk/pdbsum/3e8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e8t ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/3e8t_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e8t ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Takeout (To) proteins are found exclusively in insects and have been proposed to have important roles in various aspects of their physiology and behavior. Limited sequence similarity with juvenile hormone-binding proteins (JHBPs), which specifically bind and transport juvenile hormones in Lepidoptera, suggested a role for To proteins in binding hydrophobic ligands. We present the first crystal structure of a To protein, EpTo1 from the light brown apple moth Epiphyas postvittana, solved in-house by the single-wavelength anomalous diffraction technique using sulfur anomalous dispersion, and refined to 1.3 angstroms resolution. EpTo1 adopts the unusual alpha/beta-wrap fold, seen only for JHBP and several mammalian lipid carrier proteins, a scaffold tailored for the binding and/or transport of hydrophobic ligands. EpTo1 has a 45 angstroms long, purely hydrophobic, internal tunnel that extends for the full length of the protein and accommodates a bound ligand. The latter was shown by mass spectrometry to be ubiquinone-8 and is probably derived from Escherichia coli. The structure provides the first direct experimental evidence that To proteins are ligand carriers; gives insights into the nature of endogenous ligand(s) of EpTo1; shows, by comparison with JHBP, a basis for different ligand specificities; and suggests a mechanism for the binding/release of ligands.
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===Crystal Structure of Epiphyas postvittana Takeout 1===
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Crystal structure of Epiphyas postvittana takeout 1 with bound ubiquinone supports a role as ligand carriers for takeout proteins in insects.,Hamiaux C, Stanley D, Greenwood DR, Baker EN, Newcomb RD J Biol Chem. 2009 Feb 6;284(6):3496-503. Epub 2008 Dec 10. PMID:19073605<ref>PMID:19073605</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_19073605}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3e8t" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 19073605 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19073605}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Epipo]]
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3E8T is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Epiphyas_postvittana Epiphyas postvittana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E8T OCA].
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[[Category: Large Structures]]
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[[Category: Baker, E N]]
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==Reference==
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[[Category: Greenwood, D R]]
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<ref group="xtra">PMID:19073605</ref><references group="xtra"/>
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[[Category: Hamiaux, C]]
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[[Category: Epiphyas postvittana]]
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[[Category: Newcomb, R D]]
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[[Category: Baker, E N.]]
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[[Category: Stanley, D]]
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[[Category: Greenwood, D R.]]
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[[Category: Hamiaux, C.]]
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[[Category: Newcomb, R D.]]
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[[Category: Stanley, D.]]
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[[Category: Epiphyas postvittana]]
[[Category: Epiphyas postvittana]]
[[Category: Takeout]]
[[Category: Takeout]]
[[Category: Transport protein]]
[[Category: Transport protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 11:14:50 2009''
 

Current revision

Crystal Structure of Epiphyas postvittana Takeout 1

PDB ID 3e8t

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