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3eqe
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3eqe is ON HOLD Authors: Vorobiev, S.M., Su, M., Seetharaman, J., Benach, J., Forouhar, F., Clayton, G., Cooper, B., Wang, H., Foote, E.L., Ciccosan...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the YubC protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR112.== | |
| - | + | <StructureSection load='3eqe' size='340' side='right'caption='[[3eqe]], [[Resolution|resolution]] 2.82Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3eqe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EQE FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU31140, yubC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr> | |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eqe OCA], [https://pdbe.org/3eqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eqe RCSB], [https://www.ebi.ac.uk/pdbsum/3eqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eqe ProSAT], [https://www.topsan.org/Proteins/NESGC/3eqe TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/3eqe_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eqe ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bacillus globigii migula 1900]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Benach, J]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Clayton, G]] | ||
| + | [[Category: Cooper, B]] | ||
| + | [[Category: Foote, E L]] | ||
| + | [[Category: Forouhar, F]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Mao, L]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Su, M]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Wang, H]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: Cystein dioxygenase]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Sr112]] | ||
| + | [[Category: Yubc]] | ||
Current revision
Crystal structure of the YubC protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR112.
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Categories: Bacillus globigii migula 1900 | Large Structures | Acton, T B | Benach, J | Ciccosanti, C | Clayton, G | Cooper, B | Foote, E L | Forouhar, F | Hunt, J F | Mao, L | Montelione, G T | Structural genomic | Seetharaman, J | Su, M | Tong, L | Vorobiev, S M | Wang, H | Xiao, R | Cystein dioxygenase | Nesg | Oxidoreductase | PSI, Protein structure initiative | Sr112 | Yubc
