This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2p4z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:54, 2 March 2022) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p4z.png|left|200px]]
 
-
{{STRUCTURE_2p4z| PDB=2p4z | SCENE= }}
+
==A Ferredoxin-like Metallo-beta-lactamase Superfamily Protein from Thermoanaerobacter tengcongensis==
-
 
+
<StructureSection load='2p4z' size='340' side='right'caption='[[2p4z]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
===A Ferredoxin-like Metallo-beta-lactamase Superfamily Protein from Thermoanaerobacter tengcongensis===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2p4z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cals4 Cals4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P4Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P4Z FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p4z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p4z OCA], [https://pdbe.org/2p4z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p4z RCSB], [https://www.ebi.ac.uk/pdbsum/2p4z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p4z ProSAT]</span></td></tr>
-
[[2p4z]] is a 2 chain structure of [[Beta-lactamase]] with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P4Z OCA].
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p4/2p4z_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p4z ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Beta-lactamase|Beta-lactamase]]
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:018431751</ref><references group="xtra"/>
+
[[Category: Cals4]]
-
[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
+
[[Category: Large Structures]]
-
[[Category: Gu, S Y.]]
+
[[Category: Gu, S Y]]
-
[[Category: Liang, D C.]]
+
[[Category: Liang, D C]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Metal-dependent hydrolases of the beta-lactamase superfamily ii]]
[[Category: Metal-dependent hydrolases of the beta-lactamase superfamily ii]]

Current revision

A Ferredoxin-like Metallo-beta-lactamase Superfamily Protein from Thermoanaerobacter tengcongensis

PDB ID 2p4z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools