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3fhw
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:3fhw.jpg|left|200px]] | ||
| - | + | ==Crystal structure of the protein priB from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR162.== | |
| - | + | <StructureSection load='3fhw' size='340' side='right'caption='[[3fhw]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3fhw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"acinetobacter_parapertussis"_(eldering_and_kendrick_1938)_steel_and_cowan_1964 "acinetobacter parapertussis" (eldering and kendrick 1938) steel and cowan 1964]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FHW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FHW FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dm4|3dm4]]</div></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">priB, BPP2467 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=519 "Acinetobacter parapertussis" (Eldering and Kendrick 1938) Steel and Cowan 1964])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fhw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fhw OCA], [https://pdbe.org/3fhw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fhw RCSB], [https://www.ebi.ac.uk/pdbsum/3fhw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fhw ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | == | + | [[https://www.uniprot.org/uniprot/PRIB_BORPA PRIB_BORPA]] Binds single-stranded DNA at the primosome assembly site (PAS).[HAMAP-Rule:MF_00720] |
| - | + | == Evolutionary Conservation == | |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Acton, T B | + | Check<jmol> |
| - | [[Category: Baran, M C | + | <jmolCheckbox> |
| - | [[Category: Forouhar, F | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fh/3fhw_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Hunt, J F | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Kuzin, A P | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Liu, J | + | </jmolCheckbox> |
| - | [[Category: Maglaqui, M | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fhw ConSurf]. |
| - | [[Category: Mao, L | + | <div style="clear:both"></div> |
| - | [[Category: Montelione, G T | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Neely, H | + | [[Category: Large Structures]] |
| - | [[Category: Rost, B | + | [[Category: Acton, T B]] |
| - | [[Category: Seetharaman, J | + | [[Category: Baran, M C]] |
| - | [[Category: Tong, L | + | [[Category: Forouhar, F]] |
| - | [[Category: Wang, D | + | [[Category: Hunt, J F]] |
| - | [[Category: Xiao, R | + | [[Category: Kuzin, A P]] |
| + | [[Category: Liu, J]] | ||
| + | [[Category: Maglaqui, M]] | ||
| + | [[Category: Mao, L]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Neely, H]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Wang, D]] | ||
| + | [[Category: Xiao, R]] | ||
[[Category: Dna binding protein]] | [[Category: Dna binding protein]] | ||
[[Category: Dna replication]] | [[Category: Dna replication]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
| - | [[Category: Northeast structural genomics consortium]] | ||
[[Category: Prib bpr162 x-ray nesg]] | [[Category: Prib bpr162 x-ray nesg]] | ||
[[Category: Primosome]] | [[Category: Primosome]] | ||
| - | [[Category: Protein structure initiative]] | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
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Current revision
Crystal structure of the protein priB from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR162.
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Categories: Large Structures | Acton, T B | Baran, M C | Forouhar, F | Hunt, J F | Kuzin, A P | Liu, J | Maglaqui, M | Mao, L | Montelione, G T | Structural genomic | Neely, H | Rost, B | Seetharaman, J | Tong, L | Wang, D | Xiao, R | Dna binding protein | Dna replication | Dna-binding | Prib bpr162 x-ray nesg | Primosome | PSI, Protein structure initiative
