This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fjy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:03, 2 March 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3fjy.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis==
-
The line below this paragraph, containing "STRUCTURE_3fjy", creates the "Structure Box" on the page.
+
<StructureSection load='3fjy' size='340' side='right'caption='[[3fjy]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FJY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FJY FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fjy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fjy OCA], [https://pdbe.org/3fjy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fjy RCSB], [https://www.ebi.ac.uk/pdbsum/3fjy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fjy ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3fjy TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3fjy| PDB=3fjy | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fj/3fjy_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
3FJY is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bifidobacterium_adolescentis_atcc_15703 Bifidobacterium adolescentis atcc 15703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FJY OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bifidobacterium adolescentis atcc 15703]]
+
</jmolCheckbox>
-
[[Category: Burley, S K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fjy ConSurf].
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Palani, K.]]
+
__TOC__
-
[[Category: Swaminathan, S.]]
+
</StructureSection>
-
[[Category: 11181h]]
+
[[Category: Large Structures]]
-
[[Category: Dimer]]
+
[[Category: Burley SK]]
-
[[Category: Hydrolase]]
+
[[Category: Palani K]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Swaminathan S]]
-
[[Category: Nysgxrc]]
+
-
[[Category: Probable mutt1 protein]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 14 13:37:27 2009''
+

Current revision

Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis

PDB ID 3fjy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools