This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3flh
From Proteopedia
(Difference between revisions)
m (Protected "3flh" [edit=sysop:move=sysop]) |
|||
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3flh.png|left|200px]] | ||
| - | + | ==Crystal structure of lp_1913 protein from Lactobacillus plantarum,Northeast Structural Genomics Consortium Target LpR140B== | |
| - | + | <StructureSection load='3flh' size='340' side='right'caption='[[3flh]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3flh]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"lactobacillus_arabinosus"_fred_et_al. "lactobacillus arabinosus" fred et al.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FLH FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[3flh]] is a 3 chain structure with sequence from [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lp_1913 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1590 "Lactobacillus arabinosus" Fred et al.])</td></tr> |
| - | [[Category: Lactobacillus | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3flh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3flh OCA], [https://pdbe.org/3flh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3flh RCSB], [https://www.ebi.ac.uk/pdbsum/3flh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3flh ProSAT], [https://www.topsan.org/Proteins/NESGC/3flh TOPSAN]</span></td></tr> |
| - | [[Category: Acton, T B | + | </table> |
| - | [[Category: Belote, R L | + | == Evolutionary Conservation == |
| - | [[Category: Chen, Y | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Ciccosanti, C | + | Check<jmol> |
| - | [[Category: Everett, J K | + | <jmolCheckbox> |
| - | [[Category: Foote, E L | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fl/3flh_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Forouhar, F | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Hunt ,J F | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Montelione, G T | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3flh ConSurf]. |
| - | [[Category: Nair, R | + | <div style="clear:both"></div> |
| - | [[Category: Rost, B | + | __TOC__ |
| - | [[Category: Sahdev, S | + | </StructureSection> |
| - | [[Category: Seetharaman, J | + | [[Category: Lactobacillus arabinosus fred et al]] |
| - | [[Category: Tong, L | + | [[Category: Large Structures]] |
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Belote, R L]] | ||
| + | [[Category: Chen, Y]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Everett, J K]] | ||
| + | [[Category: Foote, E L]] | ||
| + | [[Category: Forouhar, F]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nair, R]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
[[Category: Alpha-beta protein]] | [[Category: Alpha-beta protein]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
Crystal structure of lp_1913 protein from Lactobacillus plantarum,Northeast Structural Genomics Consortium Target LpR140B
| |||||||||||
Categories: Lactobacillus arabinosus fred et al | Large Structures | Acton, T B | Belote, R L | Chen, Y | Ciccosanti, C | Everett, J K | Foote, E L | Forouhar, F | Hunt, J F | Montelione, G T | Structural genomic | Nair, R | Rost, B | Sahdev, S | Seetharaman, J | Tong, L | Alpha-beta protein | Nesg | PSI, Protein structure initiative | Unknown function
