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3fm5
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3fm5 is ON HOLD Authors: Nocek, B., Xu, X., Zheng, H., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1== | |
| + | <StructureSection load='3fm5' size='340' side='right'caption='[[3fm5]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3fm5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhojr Rhojr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FM5 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHA1_ro05125 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=101510 RHOJR])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fm5 OCA], [https://pdbe.org/3fm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fm5 RCSB], [https://www.ebi.ac.uk/pdbsum/3fm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fm5 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fm5 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fm/3fm5_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fm5 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| - | + | *[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| + | [[Category: Rhojr]] | ||
| + | [[Category: Edwards, A M]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nocek, B]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Xu, X]] | ||
| + | [[Category: Zheng, H]] | ||
| + | [[Category: Marr]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: Pf04017]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Transcription regulator]] | ||
| + | [[Category: Transcriptional regulator]] | ||
Current revision
X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1
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