This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fmv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:05, 2 March 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3fmv.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the serine phosphatase of RNA polymerase II CTD (SSU72 superfamily) from Drosophila melanogaster. Monoclinic crystal form. Northeast Structural Genomics Consortium target FR253.==
-
The line below this paragraph, containing "STRUCTURE_3fmv", creates the "Structure Box" on the page.
+
<StructureSection load='3fmv' size='340' side='right'caption='[[3fmv]], [[Resolution|resolution]] 3.31&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3fmv]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FMV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FMV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3fdf|3fdf]]</div></td></tr>
-
{{STRUCTURE_3fmv| PDB=3fmv | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CG14216, Dmel_CG14216 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fmv OCA], [https://pdbe.org/3fmv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fmv RCSB], [https://www.ebi.ac.uk/pdbsum/3fmv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fmv ProSAT], [https://www.topsan.org/Proteins/NESGC/3fmv TOPSAN]</span></td></tr>
-
===Crystal structure of the serine phosphatase of RNA polymerase II CTD (SSU72 superfamily) from Drosophila melanogaster. Monoclinic crystal form. Northeast Structural Genomics Consortium target FR253.===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3FMV is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FMV OCA].
+
<jmolCheckbox>
-
[[Category: Drosophila melanogaster]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fm/3fmv_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Baran, M C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Chen, Y.]]
+
</jmolCheckbox>
-
[[Category: Chinag, Y.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fmv ConSurf].
-
[[Category: Cunningham, K.]]
+
<div style="clear:both"></div>
-
[[Category: Fang, Y.]]
+
__TOC__
-
[[Category: Forouhar, F.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Drome]]
-
[[Category: Kuzin, A P.]]
+
[[Category: Large Structures]]
-
[[Category: Liu, J.]]
+
[[Category: Acton, T B]]
-
[[Category: Ma, L C.]]
+
[[Category: Baran, M C]]
-
[[Category: Montelione, G T.]]
+
[[Category: Chen, Y]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Chinag, Y]]
-
[[Category: Rost, B.]]
+
[[Category: Cunningham, K]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Fang, Y]]
-
[[Category: Tong, L.]]
+
[[Category: Forouhar, F]]
-
[[Category: Xiao, R.]]
+
[[Category: Hunt, J F]]
 +
[[Category: Kuzin, A P]]
 +
[[Category: Liu, J]]
 +
[[Category: Ma, L C]]
 +
[[Category: Montelione, G T]]
 +
[[Category: Structural genomic]]
 +
[[Category: Rost, B]]
 +
[[Category: Seetharaman, J]]
 +
[[Category: Tong, L]]
 +
[[Category: Xiao, R]]
[[Category: Ctd]]
[[Category: Ctd]]
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
[[Category: Fr253]]
[[Category: Fr253]]
[[Category: Nesg structure]]
[[Category: Nesg structure]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
[[Category: Serine phosphatase]]
[[Category: Serine phosphatase]]
-
[[Category: Structural genomic]]
 
[[Category: Unknown function]]
[[Category: Unknown function]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 7 09:36:43 2009''
 

Current revision

Crystal structure of the serine phosphatase of RNA polymerase II CTD (SSU72 superfamily) from Drosophila melanogaster. Monoclinic crystal form. Northeast Structural Genomics Consortium target FR253.

PDB ID 3fmv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools