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3gem
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3gem is ON HOLD Authors: OSIPIUK, J., XU, X., CUI, H., NOCEK, B., SAVCHENKO, A., EDWARDS, A.M., JOACHIMIAK, A., Midwest Center for Structural Genomi...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of short-chain dehydrogenase from Pseudomonas syringae== | |
| - | + | <StructureSection load='3gem' size='340' side='right'caption='[[3gem]], [[Resolution|resolution]] 1.83Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3gem]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pse14 Pse14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GEM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GEM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PSPPH_1072 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264730 PSE14])</td></tr> | |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gem OCA], [https://pdbe.org/3gem PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gem RCSB], [https://www.ebi.ac.uk/pdbsum/3gem PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gem ProSAT], [https://www.topsan.org/Proteins/MCSG/3gem TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ge/3gem_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gem ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pse14]] | ||
| + | [[Category: Cui, H]] | ||
| + | [[Category: Edwards, A M]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nocek, B]] | ||
| + | [[Category: Osipiuk, J]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Xu, X]] | ||
| + | [[Category: Apc65077]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Short-chain dehydrogenase]] | ||
Current revision
Crystal structure of short-chain dehydrogenase from Pseudomonas syringae
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