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3gnj
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:3gnj.jpg|left|200px]] | ||
| - | + | ==The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB== | |
| - | + | <StructureSection load='3gnj' size='340' side='right'caption='[[3gnj]], [[Resolution|resolution]] 1.99Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3gnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Deshd Deshd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNJ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Desulfitobacterium hafniense, Dhaf_4889 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272564 DESHD])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnj OCA], [https://pdbe.org/3gnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gnj RCSB], [https://www.ebi.ac.uk/pdbsum/3gnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnj ProSAT], [https://www.topsan.org/Proteins/MCSG/3gnj TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnj_consurf.spt"</scriptWhenChecked> | |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Babnigg, G | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Gu, M | + | </jmolCheckbox> |
| - | [[Category: Joachimiak, | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gnj ConSurf]. |
| - | [[Category: Kerfeld]] | + | <div style="clear:both"></div> |
| - | [[Category: Kinney, J N | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Tan, K | + | [[Category: Deshd]] |
| - | [[Category: Volkart, L | + | [[Category: Large Structures]] |
| + | [[Category: Babnigg, G]] | ||
| + | [[Category: Gu, M]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kerfeld, C]] | ||
| + | [[Category: Kinney, J N]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Tan, K]] | ||
| + | [[Category: Volkart, L]] | ||
[[Category: Apc92103]] | [[Category: Apc92103]] | ||
[[Category: Desulfitobacterium hafniense dcb]] | [[Category: Desulfitobacterium hafniense dcb]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Thioredoxin]] | [[Category: Thioredoxin]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
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| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 10:32:24 2009'' | ||
Current revision
The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB
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