This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gv1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3gv1", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (07:55, 16 March 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3gv1.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of disulfide interchange protein from Neisseria gonorrhoeae==
-
The line below this paragraph, containing "STRUCTURE_3gv1", creates the "Structure Box" on the page.
+
<StructureSection load='3gv1' size='340' side='right'caption='[[3gv1]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GV1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GV1 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gv1 OCA], [https://pdbe.org/3gv1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gv1 RCSB], [https://www.ebi.ac.uk/pdbsum/3gv1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gv1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gv1 TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3gv1| PDB=3gv1 | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Crystal structure of disulfide interchange protein from Neisseria gonorrhoeae===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/3gv1_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
3GV1 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_fa_1090 Neisseria gonorrhoeae fa 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GV1 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Neisseria gonorrhoeae fa 1090]]
+
</jmolCheckbox>
-
[[Category: Burley, S K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gv1 ConSurf].
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Swaminathan, S.]]
+
__TOC__
-
[[Category: Zhang, Z.]]
+
</StructureSection>
-
[[Category: Disulfide interchange protein]]
+
[[Category: Large Structures]]
-
[[Category: Dsbc]]
+
[[Category: Burley SK]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Swaminathan S]]
-
[[Category: Nysgxrc]]
+
[[Category: Zhang Z]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 10:37:36 2009''
+

Current revision

Crystal structure of disulfide interchange protein from Neisseria gonorrhoeae

PDB ID 3gv1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools