This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3h6e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:04, 16 March 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3h6e.jpg|left|200px]]
 
-
<!--
+
==The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans==
-
The line below this paragraph, containing "STRUCTURE_3h6e", creates the "Structure Box" on the page.
+
<StructureSection load='3h6e' size='340' side='right'caption='[[3h6e]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H6E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H6E FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h6e OCA], [https://pdbe.org/3h6e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h6e RCSB], [https://www.ebi.ac.uk/pdbsum/3h6e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h6e ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3h6e TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3h6e| PDB=3h6e | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h6/3h6e_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
3H6E is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_dsm_12444 Novosphingobium aromaticivorans dsm 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H6E OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Novosphingobium aromaticivorans dsm 12444]]
+
</jmolCheckbox>
-
[[Category: Burley, S K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h6e ConSurf].
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Swaminathan, S.]]
+
__TOC__
-
[[Category: Zhang, Z.]]
+
</StructureSection>
-
[[Category: 11200i]]
+
[[Category: Large Structures]]
-
[[Category: Carbohydrate kinase]]
+
[[Category: Burley SK]]
-
[[Category: Kinase]]
+
[[Category: Swaminathan S]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Zhang Z]]
-
[[Category: Novosphingobium aromaticivoran]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Sgx]]
+
-
[[Category: Strain dsm 12444]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 4 07:36:06 2009''
+

Current revision

The crystal structure of a carbohydrate kinase from Novosphingobium aromaticivorans

PDB ID 3h6e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools