This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hb7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3hb7" [edit=sysop:move=sysop])
Current revision (08:08, 16 March 2022) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3hb7| PDB=3hb7 | SCENE= }}
 
-
===The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A===
 
-
==About this Structure==
+
==The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A==
-
[[3hb7]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Alkaliphilus_metalliredigens_qymf Alkaliphilus metalliredigens qymf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HB7 OCA].
+
<StructureSection load='3hb7' size='340' side='right'caption='[[3hb7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
[[Category: Alkaliphilus metalliredigens qymf]]
+
== Structural highlights ==
-
[[Category: Cui, H.]]
+
<table><tr><td colspan='2'>[[3hb7]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkmq Alkmq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HB7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HB7 FirstGlance]. <br>
-
[[Category: Edwards, A.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Amet_4583 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=293826 ALKMQ])</td></tr>
-
[[Category: Ng, J.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hb7 OCA], [https://pdbe.org/3hb7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hb7 RCSB], [https://www.ebi.ac.uk/pdbsum/3hb7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hb7 ProSAT], [https://www.topsan.org/Proteins/MCSG/3hb7 TOPSAN]</span></td></tr>
-
[[Category: Savchenko, A.]]
+
</table>
-
[[Category: Stein, A J.]]
+
== Evolutionary Conservation ==
-
[[Category: Xu, X.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hb/3hb7_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hb7 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Alkmq]]
 +
[[Category: Large Structures]]
 +
[[Category: Cui, H]]
 +
[[Category: Edwards, A]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Ng, J]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Stein, A J]]
 +
[[Category: Xu, X]]
[[Category: Alkaliphilus]]
[[Category: Alkaliphilus]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
Line 18: Line 36:
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Metalliredigen]]
[[Category: Metalliredigen]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+

Current revision

The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A

PDB ID 3hb7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools