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6fp4
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6fp4 is ON HOLD Authors: Silvestri, I., Fata, F., MIele, A.E., Boumis, G., Williams, D.L., Angelucci, F. Description: Thioredoxin glutathione reduc...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1,8-Naphthyridine-2-carboxylic acid== | |
| + | <StructureSection load='6fp4' size='340' side='right'caption='[[6fp4]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6fp4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Blood_fluke Blood fluke]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FP4 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=250:(2R)-2-HYDROXY-3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC+ACID'>250</scene>, <scene name='pdbligand=E1T:1,8-naphthyridine-2-carboxylic+acid'>E1T</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Smp_048430 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6183 Blood fluke])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Thioredoxin-disulfide_reductase Thioredoxin-disulfide reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.9 1.8.1.9] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fp4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fp4 OCA], [https://pdbe.org/6fp4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fp4 RCSB], [https://www.ebi.ac.uk/pdbsum/6fp4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fp4 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Members of the FAD/NAD-linked reductase family are recognized as crucial targets in drug development for cancers, inflammatory disorders, and infectious diseases. However, individual FAD/NAD reductases are difficult to inhibit in a selective manner with off target inhibition reducing usefulness of identified compounds. Thioredoxin glutathione reductase (TGR), a high molecular weight thioredoxin reductase-like enzyme, has emerged as a promising drug target for the treatment of schistosomiasis, a parasitosis afflicting more than 200 million people. Taking advantage of small molecules selected from a high-throughput screen and using X-ray crystallography, functional assays, and docking studies, we identify a critical secondary site of the enzyme. Compounds binding at this site interfere with well-known and conserved conformational changes associated with NADPH reduction, acting as a doorstop for cofactor entry. They selectivity inhibit TGR from Schistosoma mansoni and are active against parasites in culture. Since many members of the FAD/NAD-linked reductase family have similar catalytic mechanisms the unique mechanism of inhibition identified in this study for TGR broadly opens new routes to selectively inhibit homologous enzymes of central importance in numerous diseases. | ||
| - | + | Fragment-Based Discovery of a Regulatory Site in Thioredoxin Glutathione Reductase Acting as "Doorstop" for NADPH Entry.,Silvestri I, Lyu H, Fata F, Boumis G, Miele AE, Ardini M, Ippoliti R, Bellelli A, Jadhav A, Lea WA, Simeonov A, Chen Q, Arner ESJ, Thatcher GR, Petukhov PA, Williams DL, Angelucci F ACS Chem Biol. 2018 May 25. doi: 10.1021/acschembio.8b00349. PMID:29800515<ref>PMID:29800515</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 6fp4" style="background-color:#fffaf0;"></div> |
| + | |||
| + | ==See Also== | ||
| + | *[[Thioredoxin Glutathione Reductase|Thioredoxin Glutathione Reductase]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Blood fluke]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thioredoxin-disulfide reductase]] | ||
| + | [[Category: Angelucci, F]] | ||
| + | [[Category: Boumis, G]] | ||
[[Category: Fata, F]] | [[Category: Fata, F]] | ||
| + | [[Category: MIele, A E]] | ||
[[Category: Silvestri, I]] | [[Category: Silvestri, I]] | ||
| - | [[Category: Williams, D | + | [[Category: Williams, D L]] |
| - | [[Category: | + | [[Category: Allosteric pocket]] |
| - | [[Category: | + | [[Category: Fad/nad linked reductase]] |
| + | [[Category: Flavoprotein]] | ||
| + | [[Category: Fragment]] | ||
| + | [[Category: Schistosomiasis]] | ||
Current revision
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1,8-Naphthyridine-2-carboxylic acid
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