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2vl7
From Proteopedia
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| - | == | + | |
| - | <StructureSection load='2vl7' size='340' side='right' caption='[[2vl7]], [[Resolution|resolution]] 2.25Å' scene=''> | + | ==Structure of S. tokodaii Xpd4== |
| + | <StructureSection load='2vl7' size='340' side='right'caption='[[2vl7]], [[Resolution|resolution]] 2.25Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2vl7]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2vl7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dsm_16993 Dsm 16993]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VL7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VL7 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vl7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vl7 OCA], [https://pdbe.org/2vl7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vl7 RCSB], [https://www.ebi.ac.uk/pdbsum/2vl7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vl7 ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/2vl7_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/2vl7_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vl7 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2vl7" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Helicase 3D structures|Helicase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Dsm 16993]] |
| - | [[Category: Carter, L G | + | [[Category: Large Structures]] |
| - | [[Category: Johnson, K A | + | [[Category: Carter, L G]] |
| - | [[Category: Liu, L | + | [[Category: Johnson, K A]] |
| - | [[Category: | + | [[Category: Liu, L]] |
| - | [[Category: Naismith, J H | + | [[Category: McMahon, S A]] |
| - | [[Category: Oke, M | + | [[Category: Naismith, J H]] |
| - | [[Category: White, M F | + | [[Category: Oke, M]] |
| - | [[Category: Zawadski, M | + | [[Category: White, M F]] |
| + | [[Category: Zawadski, M]] | ||
[[Category: Helicase]] | [[Category: Helicase]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
Structure of S. tokodaii Xpd4
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Categories: Dsm 16993 | Large Structures | Carter, L G | Johnson, K A | Liu, L | McMahon, S A | Naismith, J H | Oke, M | White, M F | Zawadski, M | Helicase | Unknown function
