This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hvw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3hvw", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (11:58, 30 March 2022) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3hvw.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the GGDEF domain of the PA2567 protein from Pseudomonas aeruginosa, Northeast Structural Genomics Consortium Target PaR365C==
-
The line below this paragraph, containing "STRUCTURE_3hvw", creates the "Structure Box" on the page.
+
<StructureSection load='3hvw' size='340' side='right'caption='[[3hvw]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hvw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HVW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA2567 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-
{{STRUCTURE_3hvw| PDB=3hvw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hvw OCA], [https://pdbe.org/3hvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hvw RCSB], [https://www.ebi.ac.uk/pdbsum/3hvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hvw ProSAT], [https://www.topsan.org/Proteins/NESGC/3hvw TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hv/3hvw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hvw ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of the GGDEF domain of the PA2567 protein from Pseudomonas aeruginosa, Northeast Structural Genomics Consortium Target PaR365C===
+
==See Also==
-
 
+
*[[Diguanylate cyclase|Diguanylate cyclase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3HVW is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HVW OCA].
+
[[Category: Large Structures]]
-
[[Category: Pseudomonas aeruginosa]]
+
[[Category: Acton, T B]]
-
[[Category: Acton, T B.]]
+
[[Category: Ciccosanti, C]]
-
[[Category: Ciccosanti, C.]]
+
[[Category: Everett, J K]]
-
[[Category: Everett, J K.]]
+
[[Category: Foote, E L]]
-
[[Category: Foote, E L.]]
+
[[Category: Forouhar, F]]
-
[[Category: Forouhar, F.]]
+
[[Category: Hunt, J F]]
-
[[Category: Hunt, J F.]]
+
[[Category: Lew, S]]
-
[[Category: Lew, S.]]
+
[[Category: Montelione, G T]]
-
[[Category: Montelione, G T.]]
+
[[Category: Structural genomic]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Nair, R]]
-
[[Category: Nair, R.]]
+
[[Category: Rost, B]]
-
[[Category: Rost, B.]]
+
[[Category: Sahdev, S]]
-
[[Category: Sahdev, S.]]
+
[[Category: Seetharaman, J]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Tong, L]]
-
[[Category: Tong, L.]]
+
[[Category: Wang, H]]
-
[[Category: Wang, H.]]
+
[[Category: Xiao, R]]
-
[[Category: Xiao, R.]]
+
[[Category: Alpha-beta protein]]
-
[[Category: Alpha-beta protein.]]
+
[[Category: Lyase]]
[[Category: Lyase]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 11:29:30 2009''
+

Current revision

Crystal Structure of the GGDEF domain of the PA2567 protein from Pseudomonas aeruginosa, Northeast Structural Genomics Consortium Target PaR365C

PDB ID 3hvw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3hvw"
Personal tools