This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3i2v
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3i2v| PDB=3i2v | SCENE= }} | ||
| - | ===Crystal structure of human MOCS3 rhodanese-like domain=== | ||
| - | == | + | ==Crystal structure of human MOCS3 rhodanese-like domain== |
| - | [[3i2v]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3i2v' size='340' side='right'caption='[[3i2v]], [[Resolution|resolution]] 1.25Å' scene=''> |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: Arrowsmith, C H | + | <table><tr><td colspan='2'>[[3i2v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I2V FirstGlance]. <br> |
| - | [[Category: Bacik, J P | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Bochkarev, A | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MOCS3, MOCS3_HUMAN, UBA4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | [[Category: Bountra, C | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i2v OCA], [https://pdbe.org/3i2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i2v RCSB], [https://www.ebi.ac.uk/pdbsum/3i2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i2v ProSAT]</span></td></tr> |
| - | [[Category: Dhe-Paganon, S | + | </table> |
| - | [[Category: Edwards, A M | + | == Evolutionary Conservation == |
| - | [[Category: Li, Y | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Lopez, L | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: Walker, J R | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i2/3i2v_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Weigelt, J | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i2v ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Human]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Arrowsmith, C H]] | ||
| + | [[Category: Bacik, J P]] | ||
| + | [[Category: Bochkarev, A]] | ||
| + | [[Category: Bountra, C]] | ||
| + | [[Category: Dhe-Paganon, S]] | ||
| + | [[Category: Edwards, A M]] | ||
| + | [[Category: Li, Y]] | ||
| + | [[Category: Lopez, L]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Walker, J R]] | ||
| + | [[Category: Weigelt, J]] | ||
[[Category: Atp-binding]] | [[Category: Atp-binding]] | ||
| + | [[Category: Cytoplasm]] | ||
[[Category: Mocs3]] | [[Category: Mocs3]] | ||
[[Category: Molybdenum cofactor biosynthesis]] | [[Category: Molybdenum cofactor biosynthesis]] | ||
| Line 23: | Line 41: | ||
[[Category: Rhodanese]] | [[Category: Rhodanese]] | ||
[[Category: Sgc]] | [[Category: Sgc]] | ||
| - | [[Category: Structural genomic]] | ||
| - | [[Category: Structural genomics consortium]] | ||
[[Category: Sulfurtransferase]] | [[Category: Sulfurtransferase]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
Current revision
Crystal structure of human MOCS3 rhodanese-like domain
| |||||||||||
Categories: Human | Large Structures | Arrowsmith, C H | Bacik, J P | Bochkarev, A | Bountra, C | Dhe-Paganon, S | Edwards, A M | Li, Y | Lopez, L | Structural genomic | Walker, J R | Weigelt, J | Atp-binding | Cytoplasm | Mocs3 | Molybdenum cofactor biosynthesis | Multifunctional enzyme | Nucleotide-binding | Rhodanese | Sgc | Sulfurtransferase | Transferase | Trna processing | Uba4 | Ubiquitin biology
