This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2xgg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:52, 13 April 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
==STRUCTURE OF TOXOPLASMA GONDII MICRONEMAL PROTEIN 2 A_I DOMAIN==
+
 
-
<StructureSection load='2xgg' size='340' side='right' caption='[[2xgg]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+
==Structure of Toxoplasma gondii Micronemal Protein 2 A_I Domain==
 +
<StructureSection load='2xgg' size='340' side='right'caption='[[2xgg]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2xgg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XGG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2xgg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxgo Toxgo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XGG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xgg RCSB], [http://www.ebi.ac.uk/pdbsum/2xgg PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xgg OCA], [https://pdbe.org/2xgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xgg RCSB], [https://www.ebi.ac.uk/pdbsum/2xgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xgg ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 10: Line 11:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xg/2xgg_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xg/2xgg_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xgg ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 24: Line 25:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2xgg" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Toxoplasma gondii]]
+
[[Category: Large Structures]]
-
[[Category: Boulanger, M J.]]
+
[[Category: Toxgo]]
-
[[Category: Crawford, J.]]
+
[[Category: Boulanger, M J]]
-
[[Category: Grujic, O.]]
+
[[Category: Crawford, J]]
-
[[Category: Pearce, M.]]
+
[[Category: Grujic, O]]
-
[[Category: Tonkin, M L.]]
+
[[Category: Pearce, M]]
 +
[[Category: Tonkin, M L]]
[[Category: A/i domain]]
[[Category: A/i domain]]
[[Category: Cell adhesion]]
[[Category: Cell adhesion]]

Current revision

Structure of Toxoplasma gondii Micronemal Protein 2 A_I Domain

PDB ID 2xgg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools