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3i3u
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3i3u is ON HOLD Authors: Seetharaman, J., Chen, Y., Forouhar, F., Sahdev, S., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Acton, T.B., Rost, ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of lp_1913 protein from lactobacillus plantarum, northeast structural genomics Consortium target lpr140a== | |
| - | + | <StructureSection load='3i3u' size='340' side='right'caption='[[3i3u]], [[Resolution|resolution]] 2.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3i3u]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/"lactobacillus_arabinosus"_fred_et_al. "lactobacillus arabinosus" fred et al.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I3U FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lp_1913 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1590 "Lactobacillus arabinosus" Fred et al.])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i3u OCA], [https://pdbe.org/3i3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i3u RCSB], [https://www.ebi.ac.uk/pdbsum/3i3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i3u ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/3i3u_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i3u ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Lactobacillus arabinosus fred et al]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Chen, Y]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Foote, E L]] | ||
| + | [[Category: Forouhar, F]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Janjua, H]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: Lactobacillus plantarum]] | ||
| + | [[Category: Lp_1913]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of lp_1913 protein from lactobacillus plantarum, northeast structural genomics Consortium target lpr140a
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Categories: Lactobacillus arabinosus fred et al | Large Structures | Acton, T B | Chen, Y | Ciccosanti, C | Foote, E L | Forouhar, F | Hunt, J F | Janjua, H | Montelione, G T | Structural genomic | Rost, B | Sahdev, S | Seetharaman, J | Tong, L | Xiao, R | Lactobacillus plantarum | Lp 1913 | Nesg | PSI, Protein structure initiative | Unknown function
