This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3p8z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Dengue Methyltransferase bound to a SAM-based inhibitor==
==Dengue Methyltransferase bound to a SAM-based inhibitor==
-
<StructureSection load='3p8z' size='340' side='right' caption='[[3p8z]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='3p8z' size='340' side='right'caption='[[3p8z]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3p8z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Dengue_virus_3 Dengue virus 3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P8Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3P8Z FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3p8z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Dengue_virus_3 Dengue virus 3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P8Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P8Z FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=36A:(S)-2-AMINO-4-(((2S,3S,4R,5R)-5-(6-(3-CHLOROBENZYLAMINO)-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL)METHYLTHIO)BUTANOIC+ACID'>36A</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=36A:(S)-2-AMINO-4-(((2S,3S,4R,5R)-5-(6-(3-CHLOROBENZYLAMINO)-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL)METHYLTHIO)BUTANOIC+ACID'>36A</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3p97|3p97]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3p97|3p97]]</div></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3p8z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p8z OCA], [http://pdbe.org/3p8z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3p8z RCSB], [http://www.ebi.ac.uk/pdbsum/3p8z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3p8z ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p8z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p8z OCA], [https://pdbe.org/3p8z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p8z RCSB], [https://www.ebi.ac.uk/pdbsum/3p8z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p8z ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/C1KBQ3_9FLAV C1KBQ3_9FLAV]] Envelope protein E binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes (By similarity).[SAAS:SAAS026470_004_099774]
+
[[https://www.uniprot.org/uniprot/C1KBQ3_9FLAV C1KBQ3_9FLAV]] Envelope protein E binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes (By similarity).[SAAS:SAAS026470_004_099774]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 21:
==See Also==
==See Also==
-
*[[Nonstructural protein|Nonstructural protein]]
+
*[[Nonstructural protein 3D structures|Nonstructural protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 27: Line 27:
</StructureSection>
</StructureSection>
[[Category: Dengue virus 3]]
[[Category: Dengue virus 3]]
 +
[[Category: Large Structures]]
[[Category: Lescar, J]]
[[Category: Lescar, J]]
[[Category: Noble, C G]]
[[Category: Noble, C G]]

Revision as of 08:29, 25 May 2022

Dengue Methyltransferase bound to a SAM-based inhibitor

PDB ID 3p8z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools