This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3r1x
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of 2-oxo-3-deoxygalactonate kinase from Klebsiella pneumoniae== | ==Crystal structure of 2-oxo-3-deoxygalactonate kinase from Klebsiella pneumoniae== | ||
| - | <StructureSection load='3r1x' size='340' side='right' caption='[[3r1x]], [[Resolution|resolution]] 2.09Å' scene=''> | + | <StructureSection load='3r1x' size='340' side='right'caption='[[3r1x]], [[Resolution|resolution]] 2.09Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3r1x]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3r1x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Klep7 Klep7]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3nuw 3nuw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R1X FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dgoK, KPN78578_40560, KPN_04097 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dgoK, KPN78578_40560, KPN_04097 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272620 KLEP7])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/2-dehydro-3-deoxygalactonokinase 2-dehydro-3-deoxygalactonokinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.58 2.7.1.58] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r1x OCA], [https://pdbe.org/3r1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r1x RCSB], [https://www.ebi.ac.uk/pdbsum/3r1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r1x ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 17: | Line 18: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3r1x" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 22: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: 2-dehydro-3-deoxygalactonokinase]] | [[Category: 2-dehydro-3-deoxygalactonokinase]] | ||
| - | [[Category: | + | [[Category: Klep7]] |
| + | [[Category: Large Structures]] | ||
[[Category: Cuff, M E]] | [[Category: Cuff, M E]] | ||
[[Category: Feldmann, B]] | [[Category: Feldmann, B]] | ||
Current revision
Crystal structure of 2-oxo-3-deoxygalactonate kinase from Klebsiella pneumoniae
| |||||||||||
