This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3s5q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:39, 22 June 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3s5q.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a putative glycosyl hydrolase (BDI_2473) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3s5q", creates the "Structure Box" on the page.
+
<StructureSection load='3s5q' size='340' side='right'caption='[[3s5q]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3s5q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pard8 Pard8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S5Q FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3s5q| PDB=3s5q | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BDI_2473 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=435591 PARD8])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s5q OCA], [https://pdbe.org/3s5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s5q RCSB], [https://www.ebi.ac.uk/pdbsum/3s5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s5q ProSAT]</span></td></tr>
-
===Crystal structure of a Hypothetical Glycosyl hydrolase (BDI_2473) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution===
+
</table>
-
 
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
[[3s5q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Parabacteroides_distasonis Parabacteroides distasonis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S5Q OCA].
+
[[Category: Pard8]]
-
[[Category: Parabacteroides distasonis]]
+
[[Category: Structural genomic]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
[[Category: Concanavalin a-like lectins/glucanase]]
[[Category: Concanavalin a-like lectins/glucanase]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Jcsg]]
[[Category: Jcsg]]
-
[[Category: Joint center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
[[Category: Psi-biology]]
[[Category: Psi-biology]]
-
[[Category: Structural genomic]]
 

Current revision

Crystal structure of a putative glycosyl hydrolase (BDI_2473) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution

PDB ID 3s5q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools