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3syk
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3syk is ON HOLD Authors: Mueller-Cajar, O., Stotz, M., Wendler, P., Hartl, F.U., Bracher, A., Hayer-Hartl, M. Description: Crystal structure of the...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the AAA+ protein CbbX, selenomethionine structure== | |
| + | <StructureSection load='3syk' size='340' side='right'caption='[[3syk]], [[Resolution|resolution]] 3.08Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3syk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"rhodococcus_capsulatus"_molisch_1907 "rhodococcus capsulatus" molisch 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SYK FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3syl|3syl]], [[3zuh|3zuh]]</div></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cbbX, RSKD131_2679 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 "Rhodococcus capsulatus" Molisch 1907])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3syk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3syk OCA], [https://pdbe.org/3syk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3syk RCSB], [https://www.ebi.ac.uk/pdbsum/3syk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3syk ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/CBBX_RHOSH CBBX_RHOSH]] Seems to be necessary for the expression of RuBisCO. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) catalyses the fixation of atmospheric CO(2) in photosynthesis, but tends to form inactive complexes with its substrate ribulose 1,5-bisphosphate (RuBP). In plants, Rubisco is reactivated by the AAA(+) (ATPases associated with various cellular activities) protein Rubisco activase (Rca), but no such protein is known for the Rubisco of red algae. Here we identify the protein CbbX as an activase of red-type Rubisco. The 3.0-A crystal structure of unassembled CbbX from Rhodobacter sphaeroides revealed an AAA(+) protein architecture. Electron microscopy and biochemical analysis showed that ATP and RuBP must bind to convert CbbX into functionally active, hexameric rings. The CbbX ATPase is strongly stimulated by RuBP and Rubisco. Mutational analysis suggests that CbbX functions by transiently pulling the carboxy-terminal peptide of the Rubisco large subunit into the hexamer pore, resulting in the release of the inhibitory RuBP. Understanding Rubisco activation may facilitate efforts to improve CO(2) uptake and biomass production by photosynthetic organisms. | ||
| - | + | Structure and function of the AAA+ protein CbbX, a red-type Rubisco activase.,Mueller-Cajar O, Stotz M, Wendler P, Hartl FU, Bracher A, Hayer-Hartl M Nature. 2011 Nov 2;479(7372):194-9. doi: 10.1038/nature10568. PMID:22048315<ref>PMID:22048315</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| + | </div> | ||
| + | <div class="pdbe-citations 3syk" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Rhodococcus capsulatus molisch 1907]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Bracher, A]] | ||
| + | [[Category: Hartl, F U]] | ||
| + | [[Category: Hayer-Hartl, M]] | ||
| + | [[Category: Mueller-Cajar, O]] | ||
| + | [[Category: Stotz, M]] | ||
| + | [[Category: Wendler, P]] | ||
| + | [[Category: Aaa+ protein]] | ||
| + | [[Category: Calvin cycle]] | ||
| + | [[Category: Chaperone]] | ||
| + | [[Category: Photosynthesis]] | ||
| + | [[Category: Rubisco activase]] | ||
Current revision
Crystal structure of the AAA+ protein CbbX, selenomethionine structure
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