This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3uxf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3uxf" [edit=sysop:move=sysop])
Current revision (08:14, 20 July 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3uxf is ON HOLD
+
==Structure of the fimbrial protein FimP from Actonomyces oris==
 +
<StructureSection load='3uxf' size='340' side='right'caption='[[3uxf]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3uxf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_27044 Atcc 27044]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UXF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UXF FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FimP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=544580 ATCC 27044])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3uxf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3uxf OCA], [https://pdbe.org/3uxf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3uxf RCSB], [https://www.ebi.ac.uk/pdbsum/3uxf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3uxf ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The Actinomyces oris type-1 pili are important for the initial formation of dental plaque by binding to salivary proteins that adhere to the tooth surface. Here we present the X-ray structure of FimP, the protein that is polymerized into the type-1 pilus stalk, assisted by a pili-specific sortase. FimP consists of three tandem IgG-like domains. The middle and C-terminal domains contain one autocatalyzed intramolecular isopeptide bond each, a feature used by Gram-positive bacteria for stabilization of surface proteins. While the N-terminal domain harbours all the residues necessary for forming an isopeptide bond, no such bond is observed in the crystal structure of this unpolymerized form of FimP. The monomer is further stabilized by one disulfide bond each in the N- and C-terminal domains as well as by a metal-coordinated loop protruding from the C-terminal domain. A lysine, predicted to be crucial for FimP polymerization by covalent attachment to a threonine from another subunit, is located at the rim of a groove lined with conserved residues. The groove may function as a docking site for the sortase-FimP complex. We also present sequence analyses performed on the genes encoding FimP as well as the related FimA, obtained from clinical isolates.
-
Authors: Persson, K
+
The Pilin Protein FimP from Actinomyces oris: Crystal Structure and Sequence Analyses.,Persson K, Esberg A, Claesson R, Stromberg N PLoS One. 2012;7(10):e48364. doi: 10.1371/journal.pone.0048364. Epub 2012 Oct 31. PMID:23118994<ref>PMID:23118994</ref>
-
Description: Structure of the fimbrial protein FimP from Actonomyces oris
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3uxf" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Atcc 27044]]
 +
[[Category: Large Structures]]
 +
[[Category: Persson, K]]
 +
[[Category: Adhesin]]
 +
[[Category: Bacterial surface]]
 +
[[Category: Beta sandwich]]
 +
[[Category: Cell adhesion]]
 +
[[Category: Fimbria]]
 +
[[Category: Gram-positive]]
 +
[[Category: Isopeptide]]

Current revision

Structure of the fimbrial protein FimP from Actonomyces oris

PDB ID 3uxf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools