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3mk2

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[[Image:3mk2.png|left|200px]]
 
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==Placental alkaline phosphatase complexed with Phe==
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The line below this paragraph, containing "STRUCTURE_3mk2", creates the "Structure Box" on the page.
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<StructureSection load='3mk2' size='340' side='right'caption='[[3mk2]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3mk2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MK2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MK2 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PHE:PHENYLALANINE'>PHE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
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{{STRUCTURE_3mk2| PDB=3mk2 | SCENE= }}
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1zef|1zef]], [[3mk0|3mk0]], [[3mk1|3mk1]]</div></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alkaline_phosphatase Alkaline phosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.1 3.1.3.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mk2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mk2 OCA], [https://pdbe.org/3mk2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mk2 RCSB], [https://www.ebi.ac.uk/pdbsum/3mk2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mk2 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The activity of human placental alkaline phosphatase (PLAP) is downregulated by a number of effectors such as l-phenylalanine, an uncompetitive inhibitor, 5'-AMP, an antagonist of the effects of PLAP on fibroblast proliferation and by p-nitrophenyl-phosphonate (PNPPate), a non-hydrolysable substrate analogue. For the first two, such regulation may be linked to its biological function that requires a reduced and better-regulated hydrolytic rate. To understand how such disparate ligands are able to inhibit the enzyme, we solved the structure of the complexes at 1.6A, 1.9A and 1.9A resolution, respectively. These crystal structures are the first of an alkaline phosphatase in complex with organic inhibitors. Of the three inhibitors, only l-Phe and PNPPate bind at the active site hydrophobic pocket, providing structural data on the uncompetitive inhibition process. In contrast, all three ligands interact at a remote peripheral site located 28A from the active site. In order to extend these observations to the other members of the human alkaline phosphatase family, we have modelled the structures of the other human isozymes and compared them to PLAP. This comparison highlights the crucial role played by position 429 at the active site in the modulation of the catalytic process, and suggests that the peripheral binding site may be involved in the functional specialization of the PLAP isozyme.
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===Placental alkaline phosphatase complexed with Phe===
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Structural studies of human placental alkaline phosphatase in complex with functional ligands.,Llinas P, Stura EA, Menez A, Kiss Z, Stigbrand T, Millan JL, Le Du MH J Mol Biol. 2005 Jul 15;350(3):441-51. PMID:15946677<ref>PMID:15946677</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3mk2" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_15946677}}, adds the Publication Abstract to the page
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*[[Alkaline phosphatase 3D structures|Alkaline phosphatase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 15946677 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_15946677}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[3mk2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MK2 OCA].
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==Reference==
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<ref group="xtra">PMID:015946677</ref><ref group="xtra">PMID:020693656</ref><references group="xtra"/>
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[[Category: Alkaline phosphatase]]
[[Category: Alkaline phosphatase]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Cheltsov, A.]]
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[[Category: Large Structures]]
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[[Category: Millan, J L.]]
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[[Category: Cheltsov, A]]
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[[Category: Stec, B.]]
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[[Category: Millan, J L]]
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[[Category: Stec, B]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Phe binding]]
[[Category: Phe binding]]

Current revision

Placental alkaline phosphatase complexed with Phe

PDB ID 3mk2

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