This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tw5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:34, 27 July 2022) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of the GP42 transglutaminase from Phytophthora sojae==
==Crystal structure of the GP42 transglutaminase from Phytophthora sojae==
-
<StructureSection load='3tw5' size='340' side='right' caption='[[3tw5]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
+
<StructureSection load='3tw5' size='340' side='right'caption='[[3tw5]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3tw5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Phytophthora_sojae Phytophthora sojae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TW5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TW5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3tw5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Physo Physo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TW5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TW5 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC+ACID'>CXS</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-glutamine_gamma-glutamyltransferase Protein-glutamine gamma-glutamyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.13 2.3.2.13] </span></td></tr>
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Protein-glutamine_gamma-glutamyltransferase Protein-glutamine gamma-glutamyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.13 2.3.2.13] </span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tw5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tw5 RCSB], [http://www.ebi.ac.uk/pdbsum/3tw5 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tw5 OCA], [https://pdbe.org/3tw5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tw5 RCSB], [https://www.ebi.ac.uk/pdbsum/3tw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tw5 ProSAT]</span></td></tr>
-
<table>
+
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 13: Line 14:
Structural and phylogenetic analyses of the GP42 transglutaminase from Phytophthora sojae reveal an evolutionary relationship between oomycetes and marine Vibrio bacteria.,Reiss K, Kirchner E, Gijzen M, Zocher G, Loeffelhardt B, Nuernberger T, Stehle T, Brunner F J Biol Chem. 2011 Oct 12. PMID:21994936<ref>PMID:21994936</ref>
Structural and phylogenetic analyses of the GP42 transglutaminase from Phytophthora sojae reveal an evolutionary relationship between oomycetes and marine Vibrio bacteria.,Reiss K, Kirchner E, Gijzen M, Zocher G, Loeffelhardt B, Nuernberger T, Stehle T, Brunner F J Biol Chem. 2011 Oct 12. PMID:21994936<ref>PMID:21994936</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3tw5" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Phytophthora sojae]]
+
[[Category: Large Structures]]
 +
[[Category: Physo]]
[[Category: Protein-glutamine gamma-glutamyltransferase]]
[[Category: Protein-glutamine gamma-glutamyltransferase]]
-
[[Category: Kirchner, E.]]
+
[[Category: Kirchner, E]]
-
[[Category: Reiss, K.]]
+
[[Category: Reiss, K]]
-
[[Category: Stehle, T.]]
+
[[Category: Stehle, T]]
-
[[Category: Zocher, G.]]
+
[[Category: Zocher, G]]
[[Category: Convergent evolution]]
[[Category: Convergent evolution]]
[[Category: Cysteine protease]]
[[Category: Cysteine protease]]

Current revision

Crystal structure of the GP42 transglutaminase from Phytophthora sojae

PDB ID 3tw5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools